KEGG   Fragilariopsis cylindrus: FRACYDRAFT_181175
Entry
FRACYDRAFT_181175 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K12572  PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FRACYDRAFT_181175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fcy03019]
    FRACYDRAFT_181175
Messenger RNA biogenesis [BR:fcy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FRACYDRAFT_181175
  mRNA degradation factors
   3'-5' decay
    Pan complex
     FRACYDRAFT_181175
SSDB
Motif
Pfam: Pan3_PK Pkinase
Other DBs
NCBI-ProteinID: OEU20608
JGI: 181175
UniProt: A0A1E7FR28
LinkDB
Position
Unknown
AA seq 402 aa
MDPSDPRHKAIPLPYCNAFCLDPPNPQNSRSSFGYPAATFQVVNRDDGHLYCLRRFDNIK
SVNPKIASTVLEQWASIEHPGIATLHQCFVSQRAVFFVHQYIPGTRSFLQVANPPTLSEP
VIWSAICQMVTVIRRVHGARLALRTLDLRHTLIQMDALRLRIFVNCLGIVDALEYESRKS
LQELQAEDMRNFGRWILSIVTGTNITISTDPQTLQNCERYCMQNYSRELRHFILTLSRSQ
NPPSILDVSRALSGRLMDELDSTQLSLMRTEKALSGEYESGRALRLLLKLGFVNERPENG
ANRRWSQSGDCYVLTLFRDYVFHQADGAGNPVMDLGHVVTALNKLDAADEEKIVLSSRDG
KSLMVVSYADVARCLDSTYHELCSGSTPPQALQRRQQQGQPY
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggatccatccgatccacggcacaaggcaattccattgccatactgcaacgctttttgt
ttggatccacccaaccctcaaaattcacgttcatcatttgggtaccctgctgctaccttc
caggttgtcaacagggatgacggacacttgtattgccttagacgattcgacaatatcaag
tcggtgaacccaaaaattgcttctactgtattggaacaatgggctagcattgaacaccca
ggaattgctactctccatcaatgttttgtttcacaacgtgcagtattttttgtacatcag
tatattcccggcacgcgaagtttccttcaagttgcaaatcctccaaccttgagtgaaccc
gtcatttggagtgccatttgtcaaatggtgactgtcattagacgagtccatggtgccaga
ttggctctgcgcacattggacttgcgtcataccttgatacaaatggacgcattgcgtttg
agaatattcgtcaattgcttgggtattgttgatgccctggaatatgaatcacgtaaatca
ttgcaagaattgcaagccgaggacatgcggaattttggacgatggattttaagtatcgtt
accggtacaaacattacaatttcaaccgatccgcaaaccttgcagaattgtgaacgttac
tgcatgcaaaattattcacgagaattacgacatttcatcttgaccttaagtcggagtcaa
aatcctccgtcgattttagatgtcagtagagccctgtcgggtcgtttaatggatgaatta
gattcgactcaactttccctaatgcgtacagaaaaagctttatcaggcgagtacgaatca
ggccgagcattgcgtcttttacttaaacttggattcgtcaacgaaaggcccgaaaatgga
gctaaccgtagatggtcgcaatcgggagactgttatgttttgacattatttcgtgattat
gtctttcatcaagccgacggtgcaggtaatccagtcatggatctgggtcatgtcgtgaca
gctctgaacaaattggacgcggctgatgaagagaaaatagttttgagctctcgtgatgga
aaatcattgatggtcgtgagctatgcagatgtggctcgatgcttggactcgacctaccac
gaattatgctctggatccacaccaccacaagcccttcagcgaagacagcagcagggtcaa
ccctattaa

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