Fragilariopsis cylindrus: FRACYDRAFT_181536
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Entry
FRACYDRAFT_181536 CDS
T04784
Name
(GenBank) BOP1NT-domain-containing protein
KO
K14824
ribosome biogenesis protein ERB1
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_181536
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
FRACYDRAFT_181536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BOP1NT
WD40
ANAPC4_WD40
NBCH_WD40
DUF5887
Motif
Other DBs
NCBI-ProteinID:
OEU20347
JGI:
181536
UniProt:
A0A1E7FQD8
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MNRIGRVPLHWYDEYDHIGYDAHGKKVIKTASAEGGNLIDQALANADNKGKDRFMIHDAL
NDKNITLTARQLELIRRIQGGAYAHPEFDGNADYIDYYSGVNPEISGLNSNRDLPKAKFQ
PSKWEKMQVDDLLRKLANGDISMDYLTGKVRDMNDVHKNNKNKEKPYMLWTGDEEDELDR
KKGPQHIAAPKLPPPGHAESYIPPDEYLPTEEEIEQWKDLEPKERPHGLLIPKKFPNLRS
VGAYEHSVRETFERCLDLYLCPRIMKRRLNIDPESLVPKLPKASDLRPFPTAKCIQYNTP
YEGVTPPIIRCVTASPDGKFMASGASDGFVRLWEVETGRLLRSWNASKAALSAESEAEGS
NGTEDTKPVVCLEWNPNPSHHCLLAAVGKCAVLIATGTEGQHNAEITAALLSSAKSGGDV
SSAKAAKAVQWVTMSETETPVSSFAGFSGPISALRTKAEMSKVRWHVKGDYFVSISPKAG
APSVLIHQLSKGNSQQPFSKAKGEAQAACFHPNKPFLFVASQQHVRVYHLVKQAMVKRLI
SGCRWISSLDIHKSGDHLIVGSLDRRMVWFDLDLSSTPYKTLKYHERAVRAVQFHQRYPL
MASASDDGSVHIFHSMVYSDLMRNPLIVPVKILRGHTIQNRHGVLTLAFHPTQPWIFTAG
ADGKIFLYQDI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggattggaagagtccctcttcattggtatgacgagtacgatcatattggatat
gatgcccatgggaagaaggttatcaagacagccagcgcagagggcggaaatcttatagat
caggctcttgcaaatgctgacaataaaggaaaggataggtttatgattcatgatgctctc
aatgataagaacataacgcttactgctcgtcaactagagctgatcagaagaattcaaggc
ggagcttacgcacatcctgaatttgacggtaatgctgactatattgattattacagtgga
gtcaaccccgaaatatcaggtcttaactccaatcgagacctacccaaggcaaagtttcaa
ccaagtaaatgggaaaaaatgcaggttgatgatcttcttcgaaaactcgcaaatggtgat
atcagtatggattaccttaccggaaaggtccgcgatatgaatgacgttcacaagaataat
aaaaataaggagaaaccgtacatgctatggactggtgatgaggaggatgagctcgatagg
aagaagggtccgcaacatatcgcggcacctaaactcccacctcctgggcatgctgaatca
tacattccaccggatgaatatcttcctactgaagaagaaattgaacagtggaaagatcta
gaaccaaaagaacgtccgcacggactgttgattccgaagaaatttcctaatttgcgatct
gtcggagcatatgaacattctgttcgtgaaaccttcgaacggtgtcttgatctgtattta
tgtcctcgtattatgaaacgtcgcttgaatattgatccagaaagtctcgtgcctaagctt
cctaaagcaagtgatcttagacccttcccaactgctaagtgcatacaatacaatactccc
tatgaaggcgttactccaccgattattcgctgtgtaactgcaagtcccgatggcaaattt
atggctagtggcgcttctgatggatttgtacgtttgtgggaggttgaaacaggacgtctt
ttacgaagctggaacgcatcaaaggctgctctgtcggccgaatcggaagccgagggaagt
aacggaactgaagatacgaaacctgttgtttgtttggaatggaatccaaatccatcccat
cactgtctactagcagctgttggaaaatgtgccgttcttattgctactggaactgaagga
cagcataacgctgaaattacagctgccctcctctcatctgcaaaaagtggaggagatgtt
agctctgccaaagcagccaaggctgttcaatgggtaactatgtcggaaaccgaaacgccc
gtcagttcctttgctggtttcagtggtcctatctctgcgcttcgcacgaaggctgaaatg
tcaaaagttaggtggcatgttaagggtgactactttgtctcgattagtcctaaggcaggg
gccccatccgtccttatccatcaactaagtaagggaaattcccaacagccctttagcaaa
gccaaaggtgaggcacaggctgcttgctttcatcctaacaagcctttcctctttgttgct
agtcagcaacatgttcgtgtctatcatttggtgaaacaagctatggtaaaacgactaatt
tctgggtgtaggtggatttcttcgcttgacatacacaaatcaggagaccacttgattgtt
ggaagtcttgatcgccgaatggtctggtttgatttggatttatctagcacgccctacaag
acgctgaagtaccacgagcgcgcagttcgtgccgttcaatttcaccaaaggtacccctta
atggctagtgcttctgacgatggttctgtccatatcttccacagtatggtatattccgac
ttgatgcgcaatccgcttatagtgccagttaagatattgcgagggcacacaattcagaac
aggcacggagtgttgactctagccttccatccaactcagccatggatattcacagcaggt
gcagatggcaaaatctttttgtatcaagatatctag
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