Fragilariopsis cylindrus: FRACYDRAFT_183642
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Entry
FRACYDRAFT_183642 CDS
T04784
Name
(GenBank) WD40 repeat-like protein
KO
K14018
phospholipase A-2-activating protein
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FRACYDRAFT_183642
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUL
PFU
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
Beta-prop_LRRK2
Beta-prop_RIG_2nd
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-ProteinID:
OEU18572
JGI:
183642
UniProt:
A0A1E7FK79
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MEIDWELSGQFVSDSQGIRVACVLPPLDDSADDDYRIVAGNQGGGLCEFGVPSGSLKPIE
YQHNHAISALLSSPSSSSSSSDAGCYVTGCKDNLVRVFDSTSHELMATLQGHEKPVTSMS
FVRAGAADSTNEYLVTGSWDGTAKIWDVHRQAMLATLPGHENSTCVTGLVPTKDQPANII
KIATGSAGIAQNNQIQGYTVRIWTVDIQTGQVQCQHTVANDHEGPIRDISTLGGGQGNTP
IIATCSNDGSVRLRSSYTGESLSTLTFLQQQSSHPPMLLSVAPVLEDAADNDSDDNNTAV
TSIISSAEDGHVVAWGYRDVCVTEPQIILHPSCVWKVIGLPKGDFATCCQDGTLRIFTKA
SDRMVPQAEKEAFDHAVQEATTKKQSGPSAEEVAKLPLWENNLQKRGTSEGQVQLFNKNN
NAIAAQWSASSQTWIEVGQVMGSADGGTIDGAQYDHVLPIEVDQADGGVAKLQIGYNNGE
NQFVAAQRFIDAHMLPQNHLNDIANYIEQRVGNQTPTLGMGGAGGATAASASPTPVATTG
MPMIGYKHIPVPAYKCFELSGKVAATTLEKMKKKIEEYGHLSDSQLATLLNLVNTLGATN
RYHSSKIEQDELKMISDMLEIFPRNEGFPALDLARLTVAHPDGARSSNVAYWNTMICKAL
SMCADTTDLDGPAAVAIPMLSLRLFTNAFRGGPGSLQAITSQLEPILRCNEKFITSKNKN
IRLSVATLLYNLSFYVHSKKDDASAAIIASQVVLQVDKILKSKIYETEALIRSMIALGTV
VIASPEAKETAKSAYIVSRVEMSASSHGDIAKSIAKEVYNAIA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggagattgattgggaactttcaggacaatttgtctctgatagtcagggaatacgtgtt
gcgtgtgtacttcctccattagacgattcggccgacgatgattatcgtattgtggctggt
aatcaaggaggtggtctttgtgaatttggtgttccatcaggatcattgaaaccaattgaa
tatcaacataatcatgctatatcagccctattatcatcaccgtcatcgtcgtcatcgtcg
tccgatgctggatgttatgtgaccggttgtaaggataatcttgttcgagtcttcgattct
acttcacatgaattgatggcaacactccaaggccacgaaaagcctgtaacaagtatgtca
tttgttagagctggtgctgctgatagtaccaatgagtatctagtaacgggatcttgggat
ggtacagcaaaaatttgggacgtacatcgacaggctatgttggcaactctaccaggtcat
gaaaattcgacctgtgtgacaggtttagttccaactaaggatcaacctgctaatattata
aagattgctaccgggtcagcaggaatcgctcaaaataatcaaattcagggttatacggtt
cgtatctggaccgttgatatccaaacgggtcaggtacaatgtcaacatacggtggcaaat
gaccacgaaggaccgattcgggatatcagtacattaggaggaggacaaggcaacacacca
attattgcaacttgttctaatgatggtagtgtccgattacgatcaagttatacgggtgaa
tctctatcaacattaacatttttacaacagcaatcatcacatccaccaatgttactttcc
gttgctccggtattagaagatgctgctgataatgatagtgatgataataataccgccgtc
acgagtattatatcatcggcagaagatggacacgtcgttgcttggggttatcgagatgtg
tgtgtgacagaaccacaaatcatcttacatccatcttgtgtttggaaagtaatcggtctt
ccgaagggggacttcgcaacatgctgtcaagatggaacacttcgtatttttacgaaggca
tcggatcggatggttccccaagctgaaaaggaagcttttgatcatgctgttcaagaagcc
acaacaaagaaacaatcaggaccgagtgcagaagaggttgctaagttaccactttgggag
aacaatttacaaaaacgaggaacctccgagggacaagttcaacttttcaataagaataat
aatgctattgccgcgcaatggagtgcgtcatctcaaacatggattgaggtaggacaggtt
atgggatcagccgatggtgggactattgatggtgcacaatacgaccatgttctaccaatc
gaggtggatcaggctgatggtggtgtcgctaagttacaaattggatacaacaatggcgag
aatcaatttgttgcagcacaacgatttattgatgcgcacatgttgccacaaaatcattta
aatgatatcgctaattatatcgagcaacgagtgggaaatcaaacaccaacactgggtatg
gggggagcaggaggggctactgctgcatcagcatcacccacccccgtagctactacgggt
atgccaatgattggttacaaacacataccagtaccagcctacaaatgttttgaattatcc
ggcaaagtagcagcaactacgttagaaaagatgaagaaaaagattgaggaatatggacac
ctatcggattcgcaactagcaacattgttgaatctcgtgaataccttgggtgcaactaat
cgatatcattcatcgaagatcgaacaagatgaattgaaaatgatttctgatatgctcgaa
atctttccacgtaatgagggattccctgccttagatctagctcgtcttactgtggcacat
ccggacggagcacggtcaagtaacgttgcatattggaatacgatgatctgtaaagctttg
tctatgtgtgcagatacaaccgatctggatggacccgcggcagttgctattcccatgtta
tcgttacgtctttttaccaatgcctttcgtggtgggcctggttcattacaggccattaca
agtcaattggaacctatccttagatgtaatgaaaaattcattacgtccaaaaacaaaaac
atacgattgtcagttgcgacacttctttataacctaagcttttatgttcattctaagaaa
gatgacgcatccgcagcaataatcgcatcacaggtggtattacaagttgataaaatcctt
aaatctaaaatatatgaaacagaagcattaatccgatcaatgattgcattaggaacagtc
gtcattgcaagtcctgaagcgaaagaaactgcaaagtctgcatacatagtaagtcgtgtg
gaaatgtcagcatcatcacatggtgatatagcaaaaagtattgcgaaggaagtttataac
gccattgcctaa
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