Fragilariopsis cylindrus: FRACYDRAFT_184200
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Entry
FRACYDRAFT_184200 CDS
T04784
Name
(GenBank) t-SNARE
KO
K08489
syntaxin 16
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
FRACYDRAFT_184200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_184200
Membrane trafficking [BR:
fcy04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
FRACYDRAFT_184200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
XLF_CC
NBD94
ESM4
Pox_EPC_I2-L1
Motif
Other DBs
NCBI-ProteinID:
OEU17684
JGI:
184200
UniProt:
A0A1E7FHT6
LinkDB
All DBs
Position
Unknown
AA seq
265 aa
AA seq
DB search
MTNLNNNNTKQKQPTWVVDVDQVKLILQDIRRLMEDLRSLHASRVGSVFGKDLDDMEIRI
ETMTRDVTDKFRRAERILKQVGTATRRAGGEEAAIGANIQRSLAKQLQELSVDFRQSQRK
YLAEVRAQKSGFDITGATSNDHFAGIDLSTEEGGFFTTQQVQVVDDLQEAIGSRDQEISK
IAQSIEELGTIFKELAVLVIDQGTILDRIDYNMEAVVESTKTGVTQLERAEKAQKNARPM
KCIFCLVITIFILLVILVLKQKYLK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccttaacaacaacaatacaaaacaaaaacaaccaacgtgggtggtggatgtc
gatcaggtgaaattaatattacaagatatacgacgactgatggaagatttacgttcgtta
catgcatctcgtgttggatctgtgtttggtaaagatttagatgatatggaaatacggatt
gaaactatgacacgtgacgtgactgataaattccgtagagcggaacgtatattaaagcag
gtcggtaccgccacacgtcgtgcgggtggggaggaggcggcgattggtgccaatattcaa
cgtagtttagcaaagcaattacaagaattgagtgtggactttcgacaatcacaacgtaaa
tacttagcagaagttcgtgctcaaaaaagtggattcgatataacgggtgccacgtcgaat
gatcactttgcagggattgatttatccacagaggagggtggattctttaccacacaacag
gtacaggtcgtcgatgacttacaggaagcaattggatcgcgtgatcaggaaatatcgaaa
attgcacaatctatagaagaacttggtacaatatttaaggaattagctgtccttgttatt
gatcaaggtacgatattagatcgaattgattataatatggaagctgtagtagaaagtacc
aaaacgggggttacacaattagaacgtgcagaaaaggcacaaaagaatgcaagaccgatg
aaatgtatcttttgtttagtcattacaatattcattttattagttatactagtccttaaa
caaaaatatttgaagtaa
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