Fragilariopsis cylindrus: FRACYDRAFT_186034
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Entry
FRACYDRAFT_186034 CDS
T04784
Name
(GenBank) WD40 repeat-like protein
KO
K14791
periodic tryptophan protein 1
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_186034
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
90S particles
Other 90S particles
FRACYDRAFT_186034
Pre-60S particles
Other pre-60S particles
FRACYDRAFT_186034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EIPR1
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
NBCH_WD40
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Motif
Other DBs
NCBI-ProteinID:
OEU16657
JGI:
186034
UniProt:
A0A1E7FET6
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MDDDDDDADEGSDAEDVLIRSTDAIVVLAKTEEEFATLEVMVYEQDSGNLFVHHDIPLPA
FPLCLSHGDIGPTGSAGNFCAVGTFTPGIEIWNLDVLNALEPSCVLGGEDTSMADAIMRH
NMMNESDKQRMNNTLTPAKDSSLKIGSHTDAVMSLSWNKVHRQVIASGSADCTVKLWDVT
QANSDQANAGTLRHHTDKVQSVLWHPKEGTLLATGSYDRTVALVDARATDNIKQVKIPAD
CESLAWDPFNPHCLTAACEDGTVMCWDVRKFTTKTPLWSIVANEFGGVSDLSYNPHVPGM
MATCALDKTVTIWDTFNSSIDKSSILPPKAKINKDMKVGKLFTLNFYPSSPWLLGCGGGA
KEIALWDMTQDNTIQKTFGGRTKIPTSIDETKNDVMDDETREKEENEKKQMFDSMMKSDD
SNTPSKSISDSETKKSSSASKKKKNKNKKAPHRAGR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatgatgacgatgctgatgagggcagtgatgctgaggatgttctcattcgt
agtactgacgctatagttgttctggcgaagaccgaagaggagtttgcaactttggaggtt
atggtatacgaacaggattctggaaatttatttgtacatcatgatattcctcttcctgca
tttcctttgtgtttgagtcatggtgatatcggtccgaccggttcagctggaaatttttgt
gcggtaggaaccttcactccaggaattgagatttggaatctagatgtattgaatgctctt
gaaccgtcctgtgtgttaggtggagaagatacatctatggctgatgcgattatgagacat
aatatgatgaatgaatctgataagcaacgaatgaataatacactaacaccggccaaagat
tcatctctgaaaattggtagtcatacagatgctgtcatgtcattatcatggaataaagtt
catcgtcaggtaattgccagtggatctgctgactgtactgtaaagttatgggatgtaaca
caggctaactctgaccaagccaacgccggtacacttagacatcatacagataaggtacaa
tccgttctgtggcatccaaaggaaggaacacttctcgctacaggatcgtatgatcgcact
gtagccctcgttgatgccagagctacagataatattaaacaggtgaaaattcccgccgat
tgcgaatcactggcatgggaccctttcaacccccattgcctgacagctgcctgcgaagac
gggactgtaatgtgttgggatgttcgtaaatttacgaccaagactccactatggtcaatt
gtcgcgaatgaattcggaggagttagtgatttatcatataatccccatgttcctggtatg
atggcaacatgcgctctcgataaaacggtgacaatttgggatacattcaattcctcgatt
gataaatcttctattttacctccaaaagctaaaataaataaagacatgaaagttggaaaa
ttatttacgctgaatttctatccatcctcaccgtggcttttgggatgtggaggaggtgcg
aaagaaatagctctttgggacatgacgcaagacaacacaattcagaaaacttttggtgga
agaacaaaaattcctacatcgattgacgaaacgaagaatgacgtgatggatgatgaaaca
cgggaaaaagaagagaatgaaaaaaaacaaatgttcgactctatgatgaaatcagatgat
tcgaatacaccttcaaaatcaataagtgattcagaaacgaaaaagtcatcatcggcgagc
aagaagaagaaaaataaaaacaagaaggcaccacaccgtgctggtagatag
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