Fragilariopsis cylindrus: FRACYDRAFT_186597
Help
Entry
FRACYDRAFT_186597 CDS
T04784
Name
(GenBank) Nop domain-containing protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FRACYDRAFT_186597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcy03041
]
FRACYDRAFT_186597
Spliceosome [BR:
fcy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
FRACYDRAFT_186597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-ProteinID:
OEU15469
JGI:
186597
UniProt:
A0A1E7FBE6
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MEATTTLADALLDDLDDLNDSSDDEQQNETTETHDNNNEHHQNEDDRILNQPKVGSATAA
VSRFIDTSSSTSTATRQKEREEENHQLVVKSNKYLASLGEEMGRAHGELAKTYKAKFPEL
EELLPNHINYKNAVRAIGNETDLTRVNDKLSEILSSNQIITISVAGSTTSGRQLTDAELQ
AVDTAANYMEELLVVQQQLMKFVENSMESLCPSICALVGSSIAARLLGLAGGLQELTKIP
ACNLQVLGQTKVNSESRAGMSGIAIKQHTGLLAECQLVQSVPSSHRKKALKVVAAKLALV
GRYDFSNVDSGRKRSASIGLDYRNQLEEKFIKLLEPDKAPTRKALPKPDLEAKKRRGGRR
MRRMKERFEETAMMKQANTRAFSTQQGEYGDDSMGITMGLLDTTDSGGAIRKVTEKRKMK
QADTKKTRKRAMQMAQQAKNNDGLASMELINPDANKQKVKAANEQWFKNNAGFQSALPKR
GT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaccacaacccttgcagatgctcttttggatgatctagatgatttgaatgac
tcctcagatgacgagcagcaaaatgaaacaacagaaacacacgacaacaacaatgaacac
caccaaaacgaagacgacagaattttgaaccaaccgaaagtgggatcagcaacagcagct
gtttctcgctttattgatacgtcgtcgtctaccagcacagctacaagacaaaaagaaaga
gaggaagagaatcaccagttagtcgtcaagtctaacaaatatcttgccagtctaggtgaa
gaaatgggacgagcacatggagaattggccaagacatataaagcgaaatttcctgaactc
gaagaactgcttccaaatcatataaattacaaaaacgctgtccgtgcaattggaaatgaa
acagacctgacaagagtcaatgataaacttagtgaaattcttagcagcaatcaaataata
actatatccgtcgcggggagtaccacatccggtcgtcaattgaccgatgctgaactacag
gcggtcgacacggccgcaaattatatggaagaactcctcgtcgttcaacaacaattgatg
aaattcgttgaaaattccatggaatctctctgtccaagtatttgtgcacttgttgggtcg
tccatagctgcaagacttttgggactagcgggtggtcttcaagaacttacgaagatacca
gcatgtaatcttcaagttctgggtcaaactaaggtcaattccgagtcacgggctggtatg
tcgggtattgccataaagcaacacacggggttgctagcagaatgtcaattggtccaatcg
gttccaagttcgcataggaaaaaagctttaaaggttgtagctgcaaaactagcattggta
ggacgttatgacttttccaatgtcgattcaggtcgaaagagaagtgcttctatcggattg
gactataggaatcaactcgaggagaaatttataaaattgctagaacccgataaggctccc
acccgcaaagcgttaccaaaacctgatttagaagctaagaagcgtcggggtggacgtcgg
atgcgtcgtatgaaagaacgatttgaagagacagcaatgatgaagcaggccaatacacgt
gcgtttagtactcaacaaggagaatatggagatgatagtatgggcattacgatgggttta
ctcgatacgacagatagcggtggagcgattcgtaaggtaacagaaaaacggaagatgaaa
caggccgatacaaaaaaaactcgtaaacgtgccatgcaaatggcgcagcaagccaagaat
aatgatggcttagccagtatggaactgatcaatcctgatgctaacaaacagaaagtaaag
gctgctaacgaacaatggttcaagaacaatgcaggatttcaatcagctttgccaaaaagg
ggaacatga
DBGET
integrated database retrieval system
