Fragilariopsis cylindrus: FRACYDRAFT_186955
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Entry
FRACYDRAFT_186955 CDS
T04784
Symbol
PYC2
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00020
Citrate cycle (TCA cycle)
fcy00620
Pyruvate metabolism
fcy01100
Metabolic pathways
fcy01200
Carbon metabolism
fcy01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FRACYDRAFT_186955 (PYC2)
00620 Pyruvate metabolism
FRACYDRAFT_186955 (PYC2)
Enzymes [BR:
fcy01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
FRACYDRAFT_186955 (PYC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Dala_Dala_lig_C
ATP-grasp
RimK
BSH_CzcB
ATP-grasp_3
BSH_RND
BSH_YknX
DUF2118
ATPgrasp_ST
BSH_YhbJ
GCV_H
Motif
Other DBs
NCBI-ProteinID:
OEU16010
JGI:
186955
UniProt:
A0A1E7FCX0
LinkDB
All DBs
Position
Unknown
AA seq
1231 aa
AA seq
DB search
MWKLSAAFLATLALCNNNNNAVDAFTGPFSSVGSKVSSSSPTLLRETVEKEATSSAPSVS
SPSSEKFFFKNIMAANRAEIAVRIMRAATEMNAGTVGIYVNEDKYSQHRWGADRSFLLEK
EDDATPISAYLDIDQIIQIAKDADVDAIHPGYGFLSESPEFAQACADADIAFVGPTVENL
NRFADKTSARIAAINAGVPVVPGSDGALRTSEEVVEFVEGIGLPVIIKASMGGGGKGMRV
VKRMEDLVSLFESASSEALTSFGDGSVFIERFVDRPRHIEVQVIGDGTGNVVHLWERDCS
IQRRHQKVIEMAPAFTLPMELRVQLQDYAVKLTSEAKYKNAGTVEFLVDSEMRPYFIEVN
PRIQVEHTVTEEVTGIDLVQAQMKIAAGATLEEAGLIQENISARGVAIQCRITTENPERD
FAPDTGTISLYRHAAGCGVRMDGVGYSGLKITPFFDSMIVKYTVRGSNFEEATARMSRVL
QECRIRGVKTNIPFLLNCLQHPDFTNGELTTAFIDEHPGLKKTSTSMWQFANEFQADPKK
LGSSERRLRYLANLAVNGHPPELGVDVNRLASGATASIPRPVVPKSTSAKKERSLRSILL
NEGPEGMAKAVRDNKGLLIMDTTWRDAHQSLLATRMRTQEFERCSEATNEAMANAFSLEM
WGGATFDVAMRFLHECPWKRLESLREKVPDIPFQMLLRGANAVGYTNYADNVNYKFCQQA
KDSGIDVFRVFDSLNYLDNLKLGVDAAGKAGGFVEGTMSYTGDVADPSKGKYNLEYYMKL
GRELVDMGSHSLAIKDMAGLLTPRAATLLVSALRAEFPDIPIHVHTHDTAGSGVASMLAA
AEAGADVVDGAIDAMSGMTSQPSIGAIAANLRGTDLDTGLEMAQLAPLNTYWENVRSLYA
PFESGQLSGSSDVYQHEIPGGQYTNLLFQSKQLGLTERWPEIKRKYAEANIVLGDIPKVT
PSSKVVGDLAQFMVQQNLEGKDVLDQAETLAFPDSVVNFLRGDIGIPPGGFPEPLRTKVL
KSRGLEPVEGRPGSFLKDYDFEKEREALYKAYGEENIDEKDLLSYALYPGVFKDWKDYQV
VYGDTDILPTELFLNPMKVGQEVDLELGKGRSRVIKMVAIQDVDENGSREVLFEVNGEPY
YMSVTDHSAEVEGGVREKAGAPGTVGSPMPGVVVGIKVKVGDKIKEGDTVATLSAMKMET
SVPATSTGVVTRIVVNVGDKVDGDDLLIEIE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaattatctgcggcgttccttgccactttggctctatgcaacaacaataacaac
gcagtggatgccttcacgggtccattttcttcagtcggttcgaaggtatcgtcgtcgtcg
ccgacgttgcttcgtgaaacagtagagaaggaagcaacatcctccgcaccgtcggtatct
tctccatcgtccgaaaaattcttctttaagaacattatggcggccaatcgtgccgaaatt
gctgtccgtatcatgcgagccgccacagaaatgaatgctggaacggtcggtatttatgtt
aatgaagataaatattcgcaacacagatggggtgctgatcgatcctttttgttggaaaag
gaagatgacgcaacaccgatatctgcatatcttgatattgatcaaattattcagattgcg
aaggatgcggatgttgatgcgatccatcctgggtatggattcctttctgaatcacccgaa
tttgcacaagcttgtgctgatgccgatatcgcgtttgttggaccgaccgttgaaaattta
aatcgatttgctgataaaacatcggcacgaatagctgccatcaatgctggagtgccagtc
gttccaggaagtgacggtgcattgagaacttcagaggaggttgtcgaattcgttgagggg
attggactacccgtcattattaaggcctccatgggaggtggtggtaaaggtatgcgagtt
gttaaaaggatggaagatttggtttcgttattcgaatccgctagttcggaagcccttacc
agttttggagacgggtctgtcttcatcgaacgattcgttgatcgaccccgtcatattgag
gtacaagtcatcggtgacggaactggtaacgtcgttcatttgtgggaacgtgattgctcc
attcaacgtcgtcatcaaaaggtcattgaaatggcaccagcctttacattaccaatggaa
ttacgggtacaacttcaagactacgctgtcaaattgacgtcggaggctaagtacaagaac
gctggaacggtcgaatttttggtcgactcagaaatgcgtccatacttcattgaggtcaat
ccacgaatccaagtcgaacatactgtcacagaagaagttaccggtattgatttggttcaa
gctcaaatgaaaattgccgctggtgcaacgttggaggaagctggtcttatccaagaaaat
atctcggcaagaggcgtggctattcaatgtcgaattactacggaaaaccccgagcgtgat
ttcgctccagatactggtaccatttccctctaccgtcacgcggctggttgtggtgttcga
atggacggtgttggatattcgggccttaaaattactcccttcttcgattccatgatcgtc
aagtacacggttagaggatcgaactttgaggaagcaacggcgcgtatgagccgtgtgttg
caggaatgtcgtatccgcggtgtcaagactaacatcccgttcctattgaattgcctccaa
catccagatttcacaaatggagaacttaccaccgcatttattgacgaacaccctggactg
aaaaaaacatccacatcaatgtggcaattcgccaacgaattccaagctgaccctaaaaag
ctaggttcttctgaacgccgtctccgctacttggctaatctagccgtcaatggacatcca
cctgaactaggcgttgatgtcaacagactcgcatctggagccacagcgagtatccctcgt
cctgttgttcctaaatctactagtgctaaaaaggaaagaagtttgcgtagtattctgctg
aatgaaggtcccgaaggtatggcgaaggccgttcgggacaacaagggacttttgatcatg
gatacgacctggcgtgacgctcatcaatcgttacttgccactcgtatgcgaacgcaagaa
ttcgaacgatgctcagaagctaccaacgaggccatggcgaatgctttttctcttgaaatg
tggggtggtgcgacatttgacgtggccatgcgtttcctacatgaatgcccatggaagcgg
ttggaatcactcagagagaaggttcccgatattccctttcaaatgttgctgcgcggtgct
aacgctgttggctacactaactatgctgacaatgtcaattataagttttgccagcaggca
aaagactctggaattgatgttttccgtgtctttgactcattgaattaccttgataacttg
aaattaggtgtcgacgccgcaggtaaggctggtggatttgttgagggtaccatgagttat
accggtgacgttgccgatccgtccaagggaaaatacaatttagaatactacatgaaactt
ggacgggagttggtcgatatgggttctcattctttggctatcaaggatatggctgggctt
ctcacgccaagagcggctacgcttttggtttccgcattgcgagcagaatttccagacatt
ccgatccatgttcacacgcacgacacagctggtagtggtgtcgcttccatgttggctgct
gccgaggccggtgccgatgttgttgatggagctattgatgccatgtcaggcatgacctct
cagccatccattggtgcaattgctgctaatctacgaggtaccgatcttgataccggacta
gagatggcacaactggcaccactcaacacatattgggagaacgttcgttctctgtacgct
ccattcgaatcaggtcagttaagtggaagttcggacgtttaccagcatgaaattcccggt
ggacaatacaccaatctactcttccaatcgaaacaacttggattgactgaacgatggcct
gaaatcaagcgtaaatatgccgaggcaaatattgtattgggtgatatccccaaggtcact
ccttcttcaaaggttgttggggatttggcacagttcatggtccaacagaatcttgagggt
aaagacgtattggatcaagcagaaactttggcgtttcccgattcggttgtgaacttcttg
cgaggagatattggtattccacctggtggtttcccagaaccactccgtacgaaggtcttg
aaatcacgtgggttggaacccgtcgaaggtcgacccggaagtttcctcaaggattacgat
tttgaaaaagaacgtgaagctttgtataaggcatatggcgaagaaaatatcgatgaaaag
gatttgctttcgtacgcactctatcctggggtgtttaaagattggaaggactaccaagta
gtatatggtgatactgatattcttcctacagaattatttttgaatccaatgaaagtcggt
caggaagtcgatcttgaattgggcaagggacgatcaagagttatcaaaatggttgccatt
caagacgtagatgaaaatggatcgcgcgaagtcttgttcgaggttaacggtgaaccatac
tatatgtccgtgacagaccatagcgcagaagttgagggtggggtcagagaaaaggcagga
gcacctggaaccgtaggcagtcctatgcccggggttgttgttggtatcaaagtcaaggtc
ggagataaaatcaaagagggagatactgttgccaccctttcagccatgaaaatggaaaca
tcggttccagcaacatcaactggtgtggtaacgagaatcgtcgtaaatgtcggtgataag
gttgatggcgacgatttattgatcgaaattgaataa
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