Fragilariopsis cylindrus: FRACYDRAFT_188279
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Entry
FRACYDRAFT_188279 CDS
T04784
Name
(GenBank) tryptophan synthase beta subunit-like PLP-dependent enzyme
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00260
Glycine, serine and threonine metabolism
fcy00290
Valine, leucine and isoleucine biosynthesis
fcy01100
Metabolic pathways
fcy01110
Biosynthesis of secondary metabolites
fcy01200
Carbon metabolism
fcy01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FRACYDRAFT_188279
00290 Valine, leucine and isoleucine biosynthesis
FRACYDRAFT_188279
Enzymes [BR:
fcy01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
FRACYDRAFT_188279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
ACT
ACT_6
ACT_4
HTH_animal
Motif
Other DBs
NCBI-ProteinID:
OEU14870
JGI:
188279
UniProt:
A0A1E7F9L3
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MNAIDCKNNYSYYNHPQHKKCQQHQQQQQKFATSTNKFEDKSSDAIIRDDHARRKKIEEK
QQQDHDIRIKVAEQEQQDAPITDFSDISRAMVAIRDGIRRTTCIQSYFLSELCQATIYLK
PEFRQFTGSFKERGARNAILQLLAASSKSEQQKQSKSKSKSSFGVIAASAGNHALALAYH
GKELGVPVTVVMPSIAPLLKVDRCRQFGATIIMKGAHIGESKLYAEQLAIEQKLHYINGY
DDRAIVAGAGTMGIEIMEDVPNVDIVVVPVGGGGLIAGVSCAIKTLKPSGCKVIGVEPEY
CASYTAALKAGKPVPVQVQNTLADGLAVPTVGSHAFQVATKYVDECVLVNEKDISIAVLR
LIENEKMVVEGGGATGLAALLPGGSLFGRPDIIGKNIVVPLCGGNIDTTVLGRVLERGLA
ADNRLLDFYAEVSDRPGGIAKLTQLLSEMGASIKDIYHERAWLHTSVDRVQVKCVVELNG
IDHAELLKKALIENGYPIIWKPRE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaatagattgtaagaacaactacagttactacaatcatcctcaacacaagaag
tgtcaacaacatcaacaacaacaacaaaagtttgcgacttctaccaataaatttgaagat
aaatcttcagatgcaatcatccgtgatgatcacgcccgacgcaaaaaaattgaagaaaaa
caacaacaagatcatgacattaggattaaagttgcggaacaagaacaacaagatgcaccg
attactgattttagtgatatctcacgtgctatggtagcaatccgggatggtattcgacgt
actacctgtatccaatcatactttttatcggaattatgtcaagcaacgatctatttaaaa
ccagaatttcgtcaatttactggtagttttaaagaacgtggtgccaggaatgcgatatta
caattattagcagcatcctctaaatctgaacaacaaaaacaatctaaatccaaatctaaa
tcatcttttggtgttatagctgcatccgctggtaatcatgccttagcattagcctatcat
gggaaagaattaggtgtaccggtcacagtggtgatgccatcgattgcaccattattaaaa
gtagatcgttgtcgtcaatttggtgccaccattattatgaaaggggcacatattggtgaa
tcgaaattatatgccgaacaattagctattgaacaaaagttacattatattaatggatac
gatgatcgagcaattgtggcgggtgccggaacgatggggattgaaattatggaagatgta
cccaatgtggatattgtggtagttccggtgggtggtggaggattaattgcgggtgtctct
tgtgctattaaaacattaaaaccatccggctgtaaagtaattggtgtcgaaccagaatat
tgtgcgtcgtatacagcagcactcaaagcagggaaaccggtaccggtacaagtacagaac
acattagcagatggattagcggtaccaaccgttggttcacatgcatttcaggtggctacc
aagtatgtcgatgaatgtgtgttagtgaatgaaaaggatatcagtatagctgtattacga
ttaattgaaaatgaaaaaatggtggtcgaaggtggtggtgcgacaggattagcagcatta
ttaccgggtggtagtttatttggtcgacccgatataattggtaaaaatattgtggtacca
ttatgtggtggtaatatcgataccactgttctggggagagtattagaacgtggattggcg
gctgataatcgattattagatttttatgcagaagtatccgatcgacccggtggtattgca
aaattaacacaattattaagtgaaatgggtgccagtattaaagatatataccatgaacgt
gcatggttgcatacatctgtggatcgtgtccaggtaaagtgtgttgtggaattgaatggt
atcgaccatgccgaattattaaaaaaagcattaattgaaaatggttatccaatcatatgg
aaaccaagagaatag
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