Fragilariopsis cylindrus: FRACYDRAFT_188332
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Entry
FRACYDRAFT_188332 CDS
T04784
Name
(GenBank) RNA-binding domain-containing protein
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_188332
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
90S particles
Other 90S particles
FRACYDRAFT_188332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_11
DUF8400
RRM_5
RBD_DEAH11
Mtr2
Motif
Other DBs
NCBI-ProteinID:
OEU14699
JGI:
188332
UniProt:
A0A1E7F987
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MLEPIISKTRVCIKNLPPKTTEHDLKEFLLNEEKKRCRSQKQGSKETVDDDDDDDDDNNT
SQRKIIQITDCKILMNSKGKSRKVAFVGFRQPEQALHVIETFHRTYLNMSRITVEAATAK
RIDNDNGKNKKVIDTDADKNDKKSKTTDDDDNNNNNNADKDKKVVADRKVEEFLNLMGAG
NKKSKFWSNDTAEDQGGGMEVDVDSSSSSSSSSSSSDEESDDDDDKNAKKSINEEKKTPT
TNAISDMDFLLSKTKKVDDLEAEGSDDDSDSSSSTSSSSSSSSSSSSDSDDDVDNDKNEK
MSHNENKVDDDDDDDEQQLAVAMGVSKTRLFVRNLAFETTEEELEKYFSTFGRLVECHIP
VDDQKRNKGYAFISFESAVDAMEATNQLDKVDFQGRLLHILQARPPPQSTENNNGDSKNL
TWKQKQELARKEKETKGVATGGASQGWSASFVRGDAVVDNLAERLGLRKGDILGVKDKLS
SGDAAVRLALGETQIIEENREYFRQHGVDMDALVSANDANNNQTGTPTTNSKRSKTAILV
KNLPFDTRLEELAKLFHVGQEPMNILLPPSRTIAMIEYGHSTDAKRAFRKLAYRRFKHVP
IYLEWAPLQAKQDHKDSSKKSTTNEDQSMTNNDRNSNSLDDNDNEGSGDNISSTLYVKNL
NFETTETILQDVFEKQVGKNILSVRIPRKVAPTRNGSSTIGAESRSLSMGYGFVELASHE
LAKKAIKMLQGKLIDGHSLQLAISSSTDQKSSRSKATTATGKKPPTKIMVKNVPFQATRT
ELLKLFGTFGQLKKVRLPKKFDGSHRGFAFIEFLTGKEALTAMNALSRTHLYGRHLVLEW
ASEEEDNDPSKSMERLRDKAKRDAEGAAAAKSADQRKNKKIRFE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaccgataatatcgaaaaccagagtttgtattaaaaatctcccaccgaaaaca
acagagcatgatttaaaagaattccttttgaacgaggaaaagaaacgatgtcgatcacaa
aaacagggttcgaaagaaaccgttgatgacgacgacgacgatgacgacgataataatact
agtcaacgaaaaataatacaaatcactgactgtaagatccttatgaattcaaaagggaaa
tctagaaaggttgcatttgttggatttcgtcaaccagaacaggcactacatgtaattgaa
acatttcatcgaacttatttgaatatgagtcggattaccgtggaggctgcaacagcaaag
agaattgataatgacaatggaaagaataagaaagtaatagacacagacgcagacaaaaac
gacaaaaagagtaagactactgatgatgatgataataataataataataatgccgacaag
gataaaaaagtagtggcggatagaaaagtggaagaatttttaaatctgatgggagcaggt
aacaagaaatcaaaattctggtcgaatgacacagctgaagatcaaggaggaggaatggaa
gtcgatgtggacagttctagcagcagcagcagcagcagcagtagcagtgacgaagaatct
gacgatgacgatgataagaatgccaaaaagtctataaatgaggaaaagaaaacaccaacg
acaaatgcaatatctgacatggattttttactttccaagacgaagaaagtagatgattta
gaagcagaaggaagtgacgacgactcggactcttctagcagcaccagctccagttcaagc
tccagtagcagtagcagtagtgacagtgatgatgacgttgacaatgataaaaacgaaaaa
atgagtcataatgaaaacaaagtcgacgatgatgacgacgacgacgaacagcaacttgcg
gtagcaatgggagtatcaaagactcggttgtttgtacggaatctcgcattcgaaacgact
gaagaagaactggagaaatatttttctacttttggacgattggttgaatgtcacatacct
gtagatgaccaaaaacgtaataagggatatgcatttatttcattcgaatcggccgtagat
gcaatggaagctacaaatcaactcgataaggttgactttcaaggacgtctgttacatata
ttgcaagctcgtccaccacctcaatcaaccgaaaacaataatggggattctaaaaacttg
acgtggaaacaaaaacaggaattagcacgaaaggaaaaagaaacaaaaggtgtagctact
ggtggggcttctcaaggttggtctgctagtttcgttcggggggatgccgtagtggataat
ttagcggaacgattaggactacgaaagggagacatacttggagttaaggacaaattgtcg
tcaggtgatgccgccgttcgattggctttgggtgaaacacaaatcattgaagaaaatcga
gaatattttcgacagcatggagtcgatatggatgctttggtatccgccaatgatgctaac
aacaaccagactggaacaccaacgaccaattcgaaacgtagtaagacagctattttagta
aaaaatttgcccttcgatactcgtttggaggaattggcgaaactatttcatgttggtcag
gaaccgatgaatattcttttgcctcctagcaggaccattgccatgatagagtacggacat
tccactgatgccaagagagcgtttcgtaaattagcctaccgtcgatttaagcacgtccca
atttacttggagtgggcacctttacaagccaaacaggaccacaaggactcatccaagaaa
agtactaccaatgaggatcagtcaatgacaaataatgatcgcaatagcaacagccttgac
gataacgataatgagggttcaggtgacaatatttcctccacactgtatgtgaagaatctt
aattttgaaacaacagaaacaattctacaggacgtctttgagaaacaagtgggtaaaaat
attctttctgttcgtattccgcggaaggttgctccaacgaggaatggatcttcaactatc
ggagcggaaagccgttctctatctatggggtacggatttgtggagctggcgtcgcacgaa
cttgcgaaaaaagccatcaaaatgctacagggcaaacttattgacggacactctcttcag
cttgccatttcatcttctaccgatcaaaaatcatcacgatcaaaggctactacagctacc
ggcaagaaaccacccacaaaaattatggtaaagaatgttccattccaagcaacgaggacg
gagttgttgaaactttttgggaccttcggccaacttaagaaggtacggctgcccaaaaag
tttgacgggagccatcgtggatttgccttcattgagtttttgacagggaaggaggcgttg
acggccatgaatgcactttcacgtactcatttatacggacggcatttggttctggaatgg
gctagcgaagaagaagacaatgatccaagcaaaagtatggaacgactacgagacaaagct
aaaagagatgccgagggtgcagctgccgcaaaatcagccgaccagcgaaagaataagaaa
atacgattcgagtaa
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