Fragilariopsis cylindrus: FRACYDRAFT_189250
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Entry
FRACYDRAFT_189250 CDS
T04784
Name
(GenBank) receptor of activated protein kinase C 1A component of 40S small ribosomal subunit
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
FRACYDRAFT_189250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_189250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_189250
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
FRACYDRAFT_189250
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FRACYDRAFT_189250
Exosomal proteins of colorectal cancer cells
FRACYDRAFT_189250
Exosomal proteins of bladder cancer cells
FRACYDRAFT_189250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
PROPPIN
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Cytochrom_D1
Ge1_WD40
DUF7037
Motif
Other DBs
NCBI-ProteinID:
OEU13823
JGI:
189250
UniProt:
A0A1E7F7J0
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MTLRGTLKGHGDWVTSLATTPEDPNLLLSSSRDKSVLVWQLYNGSTPSTANVEDHEYGFA
RRALRGHSHFVSDVVISSDGAFALSASWDSELRLWDIATGKTTRRFVGHEKDVLSVAFSV
DNRQIVSGSRDGTIRLWNTLGECKYAISGNDAESQGHTAWVSCVRFSPSQSVPLIVSSGW
DKLVKVWNLTNCKLRNDLVGHTGYLNTVCVSPDGSLAASGGKDNTAMLWDLNEGKRLYSL
DAGEIIHGLVFSPNRYWLCAATEDSIKIWDLESKVVVDTLRPEEPEFGRMPACTCLAWSA
DGSTLFAGYSDNVIRVYAVTSV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgagaggtacccttaagggtcacggagattgggtaaccagtctggctactaca
ccagaagatcctaatttgttattaagttcatctcgtgataaatcagttttggtttggcaa
ttatacaacggatccacaccgagcaccgccaatgtggaagatcatgaatatggtttcgca
cgtcgtgcattacgtggacattctcatttcgtttcggatgttgttattagttctgatggt
gcattcgctttgtctgcatcatgggatagtgaattacgattatgggatatcgctactgga
aaaaccacccgtcgatttgttggacatgaaaaggatgttctttctgtagcattctctgtt
gataaccgtcaaattgtttccggttcccgtgatggaacaatccgtctttggaacacactt
ggagaatgcaaatacgctatcagtggaaatgatgctgaaagtcaaggacataccgcatgg
gtatcatgtgtacgattctctccttcacaatctgttccacttattgttagttccggatgg
gacaaacttgtgaaggtatggaacttaaccaactgcaaacttcgaaatgatttggttggt
catactggatacttgaacacagtttgtgtcagtccagatggttcccttgctgcatcaggt
ggtaaggacaacactgctatgctttgggatttgaatgaaggtaagcgtctatacagttta
gatgctggtgaaatcattcacggattagtatttagtccaaaccgatactggttatgtgct
gcaactgaagattctatcaagatttgggatttggaatcaaaggttgttgttgatactctc
cgacctgaagaaccagaattcggacgtatgcctgcatgtacttgcttagcatggtctgcc
gatggttctactctctttgctggatattctgacaatgtcattcgtgtatacgccgttaca
tccgtctaa
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