Fragilariopsis cylindrus: FRACYDRAFT_189271
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Entry
FRACYDRAFT_189271 CDS
T04784
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FRACYDRAFT_189271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcy02000
]
FRACYDRAFT_189271
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_189271
04090 CD molecules [BR:
fcy04090
]
FRACYDRAFT_189271
Enzymes [BR:
fcy01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
FRACYDRAFT_189271
Transporters [BR:
fcy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
FRACYDRAFT_189271
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
FRACYDRAFT_189271
CD molecules [BR:
fcy04090
]
Proteins
FRACYDRAFT_189271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
AAA_29
AAA_22
SMC_N
RsgA_GTPase
AAA_30
AAA_15
Rad17
AAA_16
Oxidored_FMN
Motif
Other DBs
NCBI-ProteinID:
OEU13357
JGI:
189271
UniProt:
A0A1E7F5C3
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MFFEGYHTEKEREIVTNGNNSHDNDDTKDVYGDTNGNKEDEDVEKQLTEEGSDDTIDEKK
KDNEEPLATVLEVFSFARSWKTKRNLAIGLFASACSGAIQPAIAIVFSQSFVNFADSADE
NGIRNLSFTFMIIGVYAFFAMALQSAFLETAAAEMTDNMKQDWFDSLLRQDIAYYDVMDT
SGTATILTVNGKNFKRGLGRKMGDGVQFTITALGGLAFGFWCSWKLSLIILCVVPFMAII
TSWVMKLNQTKTARASESYAKAGSIVFAAVSSIRTILSLNAVEEVNSKFEEATQQAFVGA
TSQVVYLGAANGSLMAVFLFNYIPVTLYGSYLMYTDLAETGCDPSGAVSNNESCSPRAFE
VFGALMGITFAGAVLPQISASLEAFSKSLQRRSTTLSLPTYAIDTSSPDGVKPESVMGHI
KFKNVSFSYPTRLQAEVYNGLDLDIKPGTTVALCGPSGGGKSTIIQLLERFYDPSSGKIT
LDGIDLKSLNVKWLRQQIGLVSQEPKLFAMSIKDNIKIGRPSATFEEIVEAAKKSNAHDF
IESFAEGKLCSQLSGGQKQRIAIARALIMKPRIILLDEATRLSTIKNADMIAVISGGMVV
EAGNHAQLISKHGVYYDLVEAQRGKKKEGLDPSGESSRRVSVIGSDEYLARINPNVSFEN
DELINFHDVEFKYPSRPEQKIFRGLEMSIKEGETIAIVGPSGQGKSTVIQLIEQFYLPNK
GCLTYKGVQMTDLNVAWLRNQMSLVAQEPTLFDISVKDNIRFGLANATQDDVEIAAKEAN
CHDFIVSFPDGYDTIVGSTASTQISGGEKQRIAIARALLRNPKILLLDEATSALDSVSEQ
VVQATLDKITSNRNRTVVQIAHRLSTIRNSDRIIVLNNGKVRENGTHEELMALKGHYQRL
VGLQDLDDDTDRKAYTEALKEDQLSGYLVNSPMDSEKIPSSERPEASKKLDKSNAKKARS
LSKGDRSYLFIGGIGAVLAGLIFPGWGFTFAYMVDLLYLHPVFPCNVSNGQPPPPPFVTC
QNYWDYTSDDMRELSFLITYIYIALMVAALIGNTLVFYGFGTATERMNKRVRDATFKNLI
RQEVAYFDTRPASAITSQLSDDAAMIHSFSGEPIRTLVMNLASIFVGLVVSFIFMWPFAL
VALGVLPFMAFGAIAEQKMFMGEDELTGEDDTNSGIIVIESLTNIRTVASLSLESNRSDQ
FAKALYDEDPLPLRNNLIKGASSGLGPFFQQWSFALLYWWGGWLIANYPSRFTSQGFLIS
LFSLLFSLSGTAAAAQGATDRSKALAAAERIFDLMDRTSKIDPLSTEGKKNV
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcgagggatatcacacagaaaaagaaagagaaatcgtgactaatggaaacaac
agtcacgataacgatgatacaaaggatgtatatggtgatacaaatggtaataaagaagat
gaagatgtagaaaagcagctcaccgaggagggatcagatgatacaattgacgagaagaag
aaagataatgaggaaccattagcaaccgtccttgaagttttctctttcgccagatcttgg
aaaacaaaaaggaatcttgcaatcggtttatttgcttctgcctgtagtggtgcaattcaa
ccagcaattgcaattgtattttcacaaagttttgttaattttgctgatagtgctgatgaa
aatggtatacgaaatctttcctttacatttatgatcattggtgtatacgctttttttgca
atggctttgcagtcagcatttcttgaaacggcagctgcagaaatgacagataatatgaaa
caagactggttcgattctctactgagacaagatattgcatactatgatgtgatggacact
agtggtactgctacaatacttactgttaatggcaagaacttcaaaaggggccttgggcgt
aagatgggcgatggcgtgcagtttactatcaccgctcttggaggtcttgcttttggattc
tggtgttcgtggaagttaagtcttattatactatgtgttgtcccattcatggctataatt
actagctgggtgatgaaattgaaccaaacaaagacagctagagccagcgagtcatatgcc
aaggcgggaagtattgtttttgccgctgtgtcatcgattcgaacaattttgtctctaaat
gcagttgaggaggttaattctaagtttgaagaggcgacacaacaagcgtttgtcggtgca
actagtcaggtggtttatctgggtgccgcaaatggttccttgatggctgtcttcttattt
aattacatacctgttacgctttatggctcatatctaatgtacactgatctagctgaaacc
ggatgtgacccatctggagctgtttctaataatgaatcatgcagtcctcgggcgttcgaa
gtttttggagctttgatgggtataacattcgcgggagctgtgttaccgcagatctcagca
tctttggaagcatttagtaaatctctccaaagaagaagtacgacgctttctcttccgaca
tacgcgatcgatacatcttctccagacggcgtaaaacctgaatccgtaatgggtcatatc
aagttcaagaatgtgtcgtttagctatccaacgcgcctacaggctgaggtgtacaatgga
ttggatttagacatcaaacctggtacaacggttgcattgtgcggtccatctggtggtggt
aaaagcactataattcagttgctagagagattctacgatccatcgtctggtaaaattacc
ttggatgggattgatttaaagagtctaaatgtaaaatggcttaggcagcagatcggattg
gtctctcaagaaccaaagctttttgctatgagtatcaaagacaacataaagattggtcgc
cctagtgcaaccttcgaggaaatcgttgaggcagcaaaaaagtcaaatgcccacgatttt
atcgagtcgtttgccgaaggcaagttgtgttcgcaactctccgggggacaaaaacaaagg
atcgcaatcgccagggccttgattatgaagccaagaataattctcctagacgaggccaca
aggctctcaaccattaaaaatgctgacatgatagccgtcatatcaggaggaatggtcgtg
gaagctggaaaccacgcacagttgatttcgaagcatggcgtatactatgaccttgttgaa
gctcagagagggaagaagaaagaggggttggatcctagtggtgaatcttcccgtagagtc
agtgttattggaagcgatgaatacttagcacgtatcaatcctaatgtttcttttgagaac
gatgaattgattaatttccacgatgttgagttcaaatacccttcacgacccgagcagaaa
atattccgagggcttgaaatgagtataaaggaaggagagactatcgcgattgttggtccc
agcggacaaggaaaatccactgttattcaactcattgagcaattttatcttcctaacaaa
ggttgcttgacatacaaaggggttcagatgactgatttgaatgtagcatggttgcgaaac
caaatgtcgctcgttgcacaggaacctacacttttcgacattagtgtgaaagataacatc
cgatttgggttggctaatgccactcaagatgacgttgaaatagcagccaaagaagcaaat
tgtcatgatttcattgtctcattcccagatggatacgacacaattgtggggtccacggcc
agtacccaaatatcaggaggagaaaagcagaggatcgccattgcccgagcacttctgcgt
aatccgaagatccttctcttggatgaagctacttccgcacttgattcggtgtcagaacag
gttgtgcaggcgactctcgacaagattacttcgaatagaaaccgcacagtcgtccaaata
gcgcacagactttctacaattcgaaactctgacaggattattgttcttaacaatggcaag
gttagagagaatggaacacacgaagaactaatggcactgaaagggcattatcaacgtctc
gttggtttgcaagatctcgacgatgacactgataggaaggcctataccgaagctttgaag
gaagatcaattgtcgggctatttggtaaattcgcctatggactctgagaaaattccttca
tctgagagaccagaagctagcaaaaaacttgacaagtcgaatgcaaaaaaagcacgcagt
ctatcgaaaggagacagatcgtatctttttattggtggtatcggcgctgtattggctgga
ctaatttttcctgggtggggttttacgtttgcctatatggtagatctcctatacttgcat
cctgtctttccgtgcaacgtatcgaatggtcagccaccaccaccaccgtttgttacctgc
caaaactactgggactatacatcagacgatatgcgagaactttcctttcttattacgtat
atttacattgctttaatggtcgctgctttgattgggaacacgttagttttctatggtttt
ggtactgctactgagcgtatgaataagagagtacgggacgctacgttcaaaaatcttatc
agacaagaggttgcgtactttgacacgagaccagctagtgctataacgtcccagctgagt
gatgatgcggcgatgatccattcattttcaggagaaccaatccgtacactagttatgaac
ttggctagtattttcgtgggtctggttgtctcttttatttttatgtggccatttgcgtta
gtagctcttggagtcttgccttttatggcatttggagcaatagctgagcagaagatgttc
atgggagaagacgaactaacaggtgaagatgatacgaattctggaatcatcgtaattgaa
agtctcaccaatatccggacagtagcctcgttgtcacttgaaagtaaccgcagtgaccaa
tttgcaaaggctttgtatgacgaagacccgctccccctcagaaataatctcatcaaagga
gcttcgagtggtctagggccattcttccagcaatggagctttgcgctcctgtactggtgg
ggaggctggctaattgctaactatcctagtcgatttacaagccaaggcttcttgatctca
ttgttttcgctgctattttccttgtcaggtacggcggcggcagcgcaaggtgcgactgat
cgctctaaggcccttgctgcggcagaaagaatatttgatctaatggatcgaacgtccaaa
atcgacccactgagtactgaaggaaagaagaacgtttga
DBGET
integrated database retrieval system
