KEGG   Fragilariopsis cylindrus: FRACYDRAFT_189400
Entry
FRACYDRAFT_189400 CDS       T04784                                 
Name
(GenBank) WD40 repeat-like protein
  KO
K02180  cell cycle arrest protein BUB3
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fcy03041]
    FRACYDRAFT_189400
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_189400
Spliceosome [BR:fcy03041]
 Complex A
  Other components
   Complex A specific factors
    FRACYDRAFT_189400
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Core SAC proteins
     FRACYDRAFT_189400
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_WDR5 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_RIG_2nd WDR55 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_SPT8 WD40_Gbeta EIF3I Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 eIF2A
Other DBs
NCBI-ProteinID: OEU13620
JGI: 189400
UniProt: A0A1E7F645
LinkDB
Position
Unknown
AA seq 317 aa
MESGPLLSLAIPVVGSSSSSSEAKTIVTGGLDGSIKSFDITTSMVQSIGSHGSGNTNACS
CLATMSNDDDSSSSNLVVSGSWNRQLCVWDLRQNSNSNSNNNNNNNTPAAEAVLPGKAFA
MDVDVSRNRIMVATSGRRNCFFDLRMLKEKNKFQLDSVLERESSLKFQTRCVKFFPNGYG
FCLGSIEGRVGVEFLDALINDAPMKLTKYAFKCHRDSNGLVYPVNAIDFHPTHRHTFATG
GCDGTVVLWDGKNKKKLTSTPKFPTSISALCFSPDGTELAIASSYTHEEGDREQHPQDEL
YIRPILDSEATPKKVEK
NT seq 954 nt   +upstreamnt  +downstreamnt
atggagtcaggtccactgttatcgttagctattccggtagtaggctcatcatcatcatca
tcggaggcgaaaacgatcgttacgggtggattagacggtagcattaaatcatttgatatc
accacatctatggtccaatcgatcggatcacacggcagtggtaataccaatgcgtgttcg
tgtctggctactatgagtaacgacgacgactcttcttcatcaaatttagtagtttcaggt
agttggaatcgacagctgtgcgtttgggatcttcgacaaaatagtaacagtaacagtaac
aataacaataacaacaatacccccgctgctgaagctgttcttcctggtaaagcatttgct
atggatgtagacgtatcccgaaatcgtattatggtcgcaacgtcgggtcgacgcaattgt
tttttcgatttgcgtatgctgaaagaaaaaaataaattccaactcgattctgtcttggaa
cgcgaatcgtcattaaaattccagacaagatgcgtcaagtttttccccaacgggtacggg
ttttgtcttgggtctatcgaaggcagagttggcgtcgaatttcttgatgcacttatcaac
gatgcaccaatgaagcttactaaatatgcatttaaatgtcatcgggacagtaatggatta
gtgtaccctgttaacgcaatcgattttcatcctacgcaccgacacaccttcgctaccggt
ggatgtgacggaacggtcgttttatgggatggaaagaacaagaaaaaattaacttcaaca
cccaaatttccaaccagtatatcagcattgtgtttttctccagatggaaccgaactagcc
attgcctctagttacacccatgaagagggagatcgagaacaacatccccaagatgaatta
tatattcgtcctatcctggatagtgaggctactcccaaaaaagtagaaaaatag

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