KEGG   Fragilariopsis cylindrus: FRACYDRAFT_189595
Entry
FRACYDRAFT_189595 CDS       T04784                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03060  Protein export
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    FRACYDRAFT_189595
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fcy02044]
    FRACYDRAFT_189595
Enzymes [BR:fcy01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     FRACYDRAFT_189595
Secretion system [BR:fcy02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   FRACYDRAFT_189595
  Eukaryotic Sec-SRP protein
   FRACYDRAFT_189595
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_16 Ploopntkinase3 DUF5498 DUF6414 VirC1 MMR_HSR1 AAA_24 FIST_C Het-C
Other DBs
NCBI-ProteinID: OEU13328
JGI: 189595
UniProt: A0A1E7F560
LinkDB
Position
Unknown
AA seq 500 aa
MFDQLSNAISSVVKDFGPKQRITEESIKPALKSVRRALLDADVNINVADALIDGVKTRSL
GEQVVEGVTADQQFIKAMYDELVDMMGGDSSSSSSSPTPSAPPASTLAIGSAGNPAVILL
AGLQGAGKTTAAGDDEATLTTARLPKRNRKVLIAAADVYRPAAISQLEILGKSVGVEVFS
MGTDADPVDIAEKALEKAKKEGYDTLIVDTAGRQIIDENLMDELKNIKEAVKPDEILLVV
DAMTGQEAASLTASFDSAVGLTGAILTKTDGDSRGGAAVSVRGVSGKPIKFVGTGERTPD
LEPFYPDRMASRILGMGDILSIVEKAQAEVSDEEARRMNDKVKNNEFDFNDFLQQAKLVS
TMGSLGGVAKMMPGMGGVSSEQMIAAEKRLKKNEAMIAVMTEEERSNPDLLIKDSKALER
LIRIAKFSDMPLSDVKQFMSEFQKMGTMMSRMSKANDKQQDPSMAGSNGMDMAMPGNRAA
RRQTKKKKKGGKGGGGGFGM
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgttcgatcagctttcaaatgccatatcgagtgtcgttaaagattttggaccgaaacaa
cgtatcacagaagaaagtattaagcccgcccttaaaagtgttcgaagagcactattggat
gccgatgttaatatcaacgtagcagatgctcttattgatggagttaaaacacgtagtttg
ggagaacaagtcgttgagggtgtaacagcagatcaacagtttattaaggctatgtacgac
gaactcgttgatatgatgggaggtgattcatcatcatcttcttcttctccaacacctagt
gctccaccggcctctacattggccatcggaagtgcaggaaatcctgctgttattttattg
gcaggattacagggtgctggtaaaaccacagccgcaggtgatgatgaagcaactcttacg
actgctaggctccctaaacgaaatcgtaaggtacttatagcagctgctgatgtttatcgt
ccagcagcgatttcccagctcgagattcttggaaagagtgtaggcgtcgaggtcttttct
atgggtacagatgccgatccggtggatattgcagagaaggctctagaaaaagccaagaaa
gagggatacgatacactgattgtcgatacagcaggtcgtcaaattatcgatgaaaatctg
atggatgaactcaagaacatcaaagaggcggtaaagcctgacgaaatcttgttggtagtt
gatgctatgacaggacaagaggccgcttcactgactgcgtcatttgattctgctgtgggt
ttgacaggagctattctaacaaagactgatggagacagtcgtggaggtgctgccgttagt
gtacgtggagttagtgggaaaccaatcaagtttgtcggaactggagaaaggacaccagat
ttggagcccttttatccggatagaatggcatcacgtatccttggaatgggtgatatctta
agtatcgtcgagaaagctcaagcagaggtatcagacgaggaggccagaaggatgaacgac
aaggttaaaaataatgagtttgattttaacgattttctacaacaagcaaaacttgtgtcc
acaatgggatcacttggaggggtcgctaaaatgatgccaggaatgggaggtgttagttca
gagcaaatgattgcagccgaaaaacgactgaagaagaacgaggccatgattgccgttatg
acagaagaagagcgctcaaatccagatcttctaattaaagatagcaaagctctagagcgt
ttgattcggatcgctaaattttctgatatgcccctgtcagatgtgaaacaatttatgagc
gagtttcaaaaaatgggaacaatgatgagccgtatgtccaaggctaatgataaacagcag
gatcccagtatggccggttcaaacggtatggatatggctatgcctggaaatagagcagcg
cgcagacaaaccaagaaaaagaagaagggtggcaaaggtggcggcggtggttttggaatg
taa

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