Fragilariopsis cylindrus: FRACYDRAFT_191550
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Entry
FRACYDRAFT_191550 CDS
T04784
Symbol
PCNA1
Name
(GenBank) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03030
DNA replication
fcy03410
Base excision repair
fcy03420
Nucleotide excision repair
fcy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRACYDRAFT_191550 (PCNA1)
03410 Base excision repair
FRACYDRAFT_191550 (PCNA1)
03420 Nucleotide excision repair
FRACYDRAFT_191550 (PCNA1)
03430 Mismatch repair
FRACYDRAFT_191550 (PCNA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcy03032
]
FRACYDRAFT_191550 (PCNA1)
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_191550 (PCNA1)
DNA replication proteins [BR:
fcy03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
FRACYDRAFT_191550 (PCNA1)
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
FRACYDRAFT_191550 (PCNA1)
MMR (mismatch excision repair)
Other MMR factors
FRACYDRAFT_191550 (PCNA1)
TLS (translesion DNA synthesis) factors
Other TLS factors
FRACYDRAFT_191550 (PCNA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Hus1
Rad9
Motif
Other DBs
NCBI-ProteinID:
OEU12274
JGI:
191550
UniProt:
A0A1E7F2C0
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MFEAQLVEGKTFKAIIEAIKDLVVDCNLDCSEEEVAIQSMDSAHVSLVAVRLSASAFSNY
RCDRPNSLGINTANMSKILKMLGKDDSITFKAEDESPDSLTMLFEGGKSTIADFELKLMD
IETEQLGIPDTPYQCTIQMRADEFQRIVRDLQVLGDTCTISCGKEGVRFSVTGAIGNGNI
LVRSSDEDKDKVTINMEEPVELNFALRYLNFFTKATPLAENVVISMSPDVPVVVEYPIEE
FGHVKFYLAPKIEED
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaagctcaattagtcgaaggaaaaactttcaaggcaatcatcgaggccatcaag
gatctcgtcgtagattgtaatttggattgtagtgaggaagaagtagccatccaatcgatg
gactctgcacacgtttcgctcgttgctgttcggctcagtgcttcagctttttccaactat
cgttgcgacaggcccaactccttaggaatcaatacagctaacatgtcaaagatcctcaaa
atgctcggcaaggatgactccattacgttcaaagcagaggatgaatcaccagatagcctc
acgatgttgtttgagggcggaaagagtactatcgcggacttcgagttgaaactcatggat
atcgagacagagcaactcggaattcccgatactccataccaatgtacgattcaaatgcgt
gctgatgaatttcaacggatcgttcgcgaccttcaggtcttgggtgatacttgtaccatc
tcatgtggaaaagaaggagttcgcttcagtgtcactggtgctatcggtaatgggaatatc
ctcgtccgtagcagtgatgaagataaggataaggtcaccataaacatggaggaaccagtt
gagttgaattttgctcttcgttacctcaattttttcacaaaagccacgccgcttgcggaa
aatgtcgttatttcgatgtcccctgatgttcccgttgtcgtagagtacccaatcgaagaa
ttcggtcatgttaagttttatttggcacctaagatagaagaagattaa
DBGET
integrated database retrieval system
