Fragilariopsis cylindrus: FRACYDRAFT_193562
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Entry
FRACYDRAFT_193562 CDS
T04784
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K22803
structural maintenance of chromosomes protein 5
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_193562
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
FRACYDRAFT_193562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
Snapin_Pallidin
AAA_21
SMC_hinge
AAA_27
PUMA_CC
AAA_29
FlgD_ig
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
OEU10591
JGI:
193562
UniProt:
A0A1E7EXA5
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MAAVSSSPRSDQEQIEQAAKAWQLETVGDYKHGSIKRIKLTRFLTYAAVEFVPGPRLNMV
VGPNGTGKSSILCAICLGLGGEPRLLGRADQVETFIQNGEEDARIELEVANENGDDVVIT
RVIRKGESKKNRTTFTWNGETISGKKVRERASEHFQIQIDNLCTFLPQEKVGSFSGINSI
DLLKETEKTLSENQDLYDTHLKLISMQKELQGGDDQVENLNAKLENLEAEIKKYKIGVEK
MEERKKAEEQADLLRKKILWLKNDIIRDKAIKLKDKREEAIANLQQLESELEPLEEANNV
AKERLTSIQKVVSTFDKQITTQKNDMKKEEAKYQQHDDRIEEILIDITGIDTNRLNTERK
AEDYRTKVEDIQNALNTSPSIEDLEEAFRQAKEDQKNNLPRYQDKKAELQELQHKVLSVE
DEWTNAKRRLDRLQDEKEQRRNHVLRQFREVKDAYYWIHNNRNLFRKEVIGPIACEISPK
SNNAAAYLEQHISNNTLKSFVVQDKSDYDLLYQKVRKEKKIAINIIQIDRIDQAEPRPHS
DQKMAMLKQDHGIVGYLDESFEGPEVVIEALKSSSNIHKVLVGNDDTQDSLDDRDLGNIL
SESENQGNRLLGYCIFASKQGKSFKYTSQISRYSGKPSLRVDDIRPSKILTKGGNNDVAK
QELTQKMQELEDRKNKITPDIQRVDREQQELLIESQNSQQRVKDTKADCHRIQQVHRKLK
NFQRKLSETEEKLDTDDDEQKKELVGDLKKRAIVSLKAMNAHSESYNKVMEATVKASGAR
LNKELAVVEERTKKVILATDEHDGKRQECLRIKRDLKAAKILYKTSRAIAMKEAPIEDED
GNDLPLMKVLEVDLHQFQTVDHAEAALEDAEAKVNNIHSDPNVVRLYEEKKKELEETRGD
LDDMTNRKEKKIDELNLKKKPWELSLDEIVTTIDKRFGNYMRELGCKGEVRLRKGKSGDE
NSNDNEESSFEEWGVEIRVSFRENVPPSVLSAQVQSGGERSVSTIMYLMAMQDMMCAPFR
CVDEINQGLDDRNERLVFKRIVENSTKPPGANGPTDHCGQYWLITPKLLPNLTDMEVEAM
NVLFIFNGPYNLKNPQDWSTKDLIATRKRRREESNVDDE
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtatcatcatcacctcgttccgatcaagaacaaatagaacaggctgcgaag
gcgtggcagctggaaactgttggtgattacaaacatggttccattaaacggatcaaactg
acaagatttttgacctatgctgctgtagaatttgtacctggacctcgacttaatatggta
gtaggaccaaatggtactggcaagtcctcgattttatgtgcaatttgcttgggattaggg
ggagaacctcgtttgctaggacgagctgaccaagtagaaacctttattcaaaatggagag
gaggatgccaggattgaattagaagtagccaatgagaatggtgacgacgtcgttatcact
cgtgtcattcgaaagggagaaagtaaaaagaatagaacgacgtttacttggaacggtgaa
accatatcgggaaaaaaggttcgagaacgtgcctcggaacattttcaaatccaaatcgat
aatctgtgtacgttccttccacaggaaaaggtgggaagtttcagtggtatcaatagcatt
gacctgcttaaagagacggaaaagactctgagcgaaaatcaagatctgtacgatacccat
ttgaaactcatatcgatgcagaaagaacttcagggtggggacgatcaagtagagaatttg
aatgcgaaattagaaaatctggaagccgaaataaaaaaatataaaataggtgtcgaaaag
atggaagaacgaaagaaagctgaagagcaggcagatcttcttcgaaaaaagattctatgg
cttaaaaacgatattatccgcgataaagccattaaattaaaagataaacgggaagaagct
atagcaaatctgcaacaacttgagtcggaattggagccactcgaagaggcgaacaacgtc
gcaaaggaacgattgactagtatacagaaggtggtaagtaccttcgataaacagatcacg
acgcaaaaaaacgatatgaagaaggaagaggcaaaataccaacaacacgatgacagaatc
gaagagattctaatagatatcacaggtattgataccaatcgtttaaacacggaaagaaag
gcagaagattatcgtactaaggtcgaagatattcagaacgccttgaatacgagcccttcc
atagaagacctagaagaggcgtttcgtcaagcaaaagaagaccaaaagaataatcttcca
aggtaccaagataagaaagccgaattacaagaacttcagcataaagtattatctgtggag
gacgaatggaccaatgcgaaaagaaggctagatagacttcaggatgaaaaggagcaacga
cgtaatcacgttttgagacaattcagggaagtcaaagatgcatactactggattcataac
aatcgaaatttatttcgaaaggaagttattggtcccattgcttgtgagatttcacccaag
tcgaacaacgctgcggcatatttagaacagcacatttcaaacaacacgctaaaatctttc
gttgtgcaagacaagtcggattacgatttactatatcagaaagttcgaaaagagaaaaag
atcgccattaatattattcaaatcgatcgtattgaccaagccgaacctcgaccacattca
gatcaaaagatggctatgctcaaacaagatcatggtattgtcgggtatttggacgaatcg
tttgaagggccagaggtcgttatcgaagcgctaaagtcgagttcaaatatccataaagtt
ttggttggaaacgatgatactcaggacagtttggacgatagagacttgggcaacattctt
tcagagtctgaaaatcagggaaatcgcctcttaggatattgtattttcgccagcaagcaa
ggaaagtcgttcaagtacacttcacagatttctcgttattccggaaaaccatcacttcgt
gtcgatgacatcagaccttcaaagatactgacaaaaggagggaacaatgacgtcgcgaag
caggaattgacccagaaaatgcaagaactagaagaccgtaagaacaagattacaccagac
atccaacgggttgaccgtgaacaacaggagcttctaatagaaagtcaaaactcacaacaa
cgagttaaggataccaaggcggattgtcataggattcaacaggtacacagaaaattaaag
aacttccagcgcaagctaagtgaaactgaggaaaaattagataccgatgatgatgagcaa
aagaaagaactggttggtgatttaaaaaagcgcgccattgtatcactaaaggctatgaat
gctcactctgaaagctacaataaggtgatggaagcgacggtgaaagcatccggtgcgcga
ttgaacaaggaacttgctgtggtcgaggaaagaaccaaaaaagtgatattggccacagac
gaacatgatgggaaaaggcaagaatgtcttagaatcaaacgtgatcttaaggccgcaaag
attctttataagacatcgagagctatcgctatgaaagaggcaccaatcgaagacgaagat
ggaaacgatttgcctcttatgaaggtactagaggttgacttgcaccaatttcaaacagtt
gatcatgctgaggctgcacttgaagatgcagaggcgaaggtcaacaacatccactcggat
ccgaacgtcgtacgtctgtacgaagaaaagaaaaaagagctcgaggaaacaagaggagat
cttgatgatatgaccaacaggaaagagaaaaaaatagatgaattaaatcttaaaaaaaag
ccatgggaattgtcccttgacgagattgtcactacaattgacaagcgttttggcaattat
atgagggagcttggttgcaagggagaggtccgtttgagaaagggaaaatcaggagatgag
aacagtaatgataatgaggaatctagcttcgaagaatggggcgttgagatcagggtctcc
tttcgtgagaatgtcccaccgtcagtgctatcagcccaagttcaatcaggtggtgagcgg
tcagtttctaccatcatgtacttgatggccatgcaagatatgatgtgtgctcccttccgg
tgcgtagacgagatcaaccaaggtttggatgatcgaaatgaacgtttggtctttaagagg
attgttgaaaactcaacaaaacctccgggagcaaatggaccaacagatcattgtggacaa
tattggctgattacaccgaaactccttcctaatcttacggacatggaagtcgaagcgatg
aacgtcctcttcattttcaatggtccatacaaccttaagaacccacaagactggtccacc
aaagatctcattgccacaagaaagcgtcgtcgagaggaatctaatgtcgatgatgagtag
DBGET
integrated database retrieval system
