Fragilariopsis cylindrus: FRACYDRAFT_193566
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Entry
FRACYDRAFT_193566 CDS
T04784
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fcy03110
]
FRACYDRAFT_193566
Chaperones and folding catalysts [BR:
fcy03110
]
Heat shock proteins
HSP100
FRACYDRAFT_193566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
nSTAND3
Sigma54_activat
TniB
IstB_IS21
AAA_18
Clp_N
AAA_14
AAA_7
Roc
Zeta_toxin
AAA_25
ABC_tran
NBD_SMAX1
PduV-EutP
ATP_bind_1
T2SSE
Motif
Other DBs
NCBI-ProteinID:
OEU10557
JGI:
193566
UniProt:
A0A1E7EXH6
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MSSDDFNEQKYTEAGWSVVAALTKAADFYQTSTVESPILLDLLLNPAKHKAGDDAVSAQK
AVEKVLKSAGCNVIVLRKELETFLAGQPKMQGDTGSVQKTMGYNLPKVLEAARSATSTLG
DSFVSAETLLLGLVKEDDKFTTAAFLKQDIKYTDLSDVVTKIRTKAGPIISRSAEKNYEA
LLKYGIDFTERAEEGKLDPVIGRDDEIRRAIQILSRRTKNNPVLIGDPGVGKTAIAEGIA
LRMVAGDVPDTLQGCKLIGLDLAALVAGASMRGEFEERLKSVLEEVQQSDGEIVLFIDEM
HTVVGAGAAQGSMDASNLLKPALARGQLRCIGATTITEYRKYIEKDKALERRFQQVMINE
PTPEDTVSILRGLKPRYETHHGVRIRDEALLAAAKLSHRYIPDRFLPDKAIDLVDEACAK
LKNELTSKPTILDEIDRRVIQLEMERLSLQSDFESSEETVDKIDEGVRLKGIDKELEELQ
TQQTELNLKWMAEKGGVDRIKTVKTDIASVNLEIEKCEREFDLNKAAELKYAKLPPLMEE
LATLEAVAEEKGMAGGDEERMLRDEVVADDIAAVVAVWTGIPPTKLLESERSRILNMGEN
LKNRVIGQDEAVSVVTEAVQRSRAGLNDPTKPIASLIFLGPTGVGKTELCKALSEFMFDS
EDAIIRIDMSEYMEKHTVARLLGAPPGYVGYDEGGQLTDAVRRKPYSVLLFDEMEKAHPD
VFNVMLQLLDDGRLTDSKGTSVNFRNTLIVFTSNVGSQDILDLSGDGTETEKEMLKARVS
QAMKEKFKPEFLNRIDEHVIFNRLDKPALRQIVQLEINRLQKRLDDKEITIAVSDAALDY
LTDVGFDPVYGARPLKRVIQKQLETVVARGILDGQYGDGDSIAVDADEAGIDVYKTFDGG
YSNPTNDEYAQPTDNDYANPSPSPAGYPGYQEDFSETPPFN
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgacgatttcaatgagcagaagtataccgaggctggttggtctgtcgtcgcc
gctcttaccaaggcggccgatttctatcagacatccacagtagagagtcccattttattg
gacctattgctcaatccagctaagcataaagctggtgatgatgccgtatcagctcagaag
gccgtcgaaaaggtcttgaaaagtgctggttgtaacgttattgtcctaagaaaggaatta
gagaccttcctcgccggtcaacctaaaatgcaaggtgacacgggctccgtccagaaaacc
atgggttataatctccccaaggtcttggaggctgcacgaagcgccacgtcaacattggga
gattccttcgtctcagctgagacattattactgggactggtcaaggaggacgataaattt
accaccgccgcctttttaaaacaagatatcaaatacactgacctttccgatgtggtgact
aagatcagaacaaaggctggaccgatcatctcacgatctgctgagaaaaattatgaagct
ttgttgaagtatggcattgatttcaccgaacgggccgaagagggaaagctcgatcctgtc
atcggtcgagatgacgagattcgacgagcaattcaaatcttgagtcgtcgaaccaagaac
aaccctgtattaatcggtgatccaggtgtgggaaagaccgcaattgctgagggtatcgct
ctacgaatggttgcaggcgatgttcctgacactttgcagggatgtaaactaattggacta
gacttggcagcgttggtagccggagccagtatgcgtggtgaattcgaagaacgactaaaa
tcggttttggaggaagtccagcaaagtgatggagaaattgttttattcattgatgagatg
cataccgttgttggggcaggcgctgcccaagggtcgatggacgcctctaatttgttaaag
cccgcccttgctcgtggacaacttagatgtatcggcgcaaccacaatcaccgaataccgt
aaatacatagaaaaagataaggctttggagcgtcgtttccaacaagtcatgattaacgag
ccgacacccgaggatactgttagtattcttcgaggtcttaagcctcgatatgaaacccat
catggtgtccgtatccgtgatgaggcactcctcgctgctgcgaaactctcccatcggtac
attccggatcgtttccttcctgacaaagcaatcgatttggttgacgaagcttgtgctaag
ttaaagaacgagctcacctctaaacctaccatcctcgatgaaatcgatcgtcgtgtcatt
cagttggaaatggagcgtctgtcactccaatccgattttgaatctagcgaggagactgta
gataaaatcgacgaaggtgtgcgcctgaaagggattgacaaagaattagaagaactacaa
actcaacaaacagaacttaatctgaaatggatggccgaaaagggaggcgtcgatcgtatc
aagactgtcaaaactgatattgcatcagtcaacctcgaaattgagaagtgcgaacgggag
ttcgatcttaacaaagcggcggaattgaaatatgcaaaattacctccgttaatggaagaa
ctagctacactagaagctgttgcggaagaaaagggtatggcaggaggtgacgaagagcgt
atgctccgtgatgaagtagtcgcagatgatatcgccgctgtggtcgcagtttggactgga
attccaccaacaaagcttctagaaagtgaacgaagtcgcatcctcaacatgggggaaaat
ttgaagaaccgcgtcatcggtcaggatgaagccgtctcggtggtcactgaggccgtgcaa
cgctctcgagccggtcttaacgatcccacgaaacccattgcatccttaattttcttaggt
cctactggagtaggaaagactgaactctgtaaggcactgagcgaatttatgtttgactcc
gaggatgctatcatccgtattgacatgtccgaatacatggagaagcatacggtagctcga
ttgttaggtgcaccgcctggctatgtcggatatgatgaaggaggtcaacttactgatgct
gttcgtcgcaaaccttattctgtgttactttttgatgagatggaaaaggctcatcctgac
gtattcaatgttatgttgcagcttctagatgatggtcgtctgaccgacagtaaaggcacc
agcgtaaatttccgtaatacgctaattgttttcaccagtaacgtcggaagtcaagacatt
ttagacttgagcggtgacggaacggagacagaaaaagaaatgttgaaagcacgtgtatct
caagccatgaaggagaagttcaaaccagaatttttgaaccgtatcgacgagcatgttatc
ttcaatagacttgacaagcctgccctccgtcagattgtccagttggaaatcaatagactc
cagaaacgtctcgacgataaggaaattactattgccgtttctgatgcagcactagactat
ttaacggatgttgggtttgatcccgtatacggtgctcgcccattgaagcgtgttatccag
aagcaactcgaaactgtcgtcgctcgaggaattttagatggtcaatatggagatggagat
tcaattgccgtagatgctgatgaggctggaatcgatgtgtacaagacgtttgatggagga
tacagcaatccaacaaatgatgaatacgcacaaccaaccgataatgattatgccaaccca
tctccatcgccagcaggctatcctggataccaagaagatttctccgagacaccaccgttt
aattaa
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