Fragilariopsis cylindrus: FRACYDRAFT_194223
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Entry
FRACYDRAFT_194223 CDS
T04784
Symbol
Rad54_homologA
Name
(GenBank) SNF2_N-domain-containing protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FRACYDRAFT_194223 (Rad54_homologA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_194223 (Rad54_homologA)
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
FRACYDRAFT_194223 (Rad54_homologA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
OEU10010
JGI:
194223
UniProt:
A0A1E7EVH0
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MDEKEIVCFFPGAIGNPIVPHSIRNVLRPHQIEGVVFLWNCLTGHGNVSKVSPHVSYTTE
TTDEDTSIKGCILCDEMGLGKTCMTIATISALHRQKRDIYCFSPLSSGCSFNLFLSLYRF
VVVCPSSLVKNWAQEFDKWLGNVGLPKRVVVKKGGEAGLRQIKSFNTVKPNNTSEVLIIS
YDLFRMNATVLENVKNMALLVIDEGHRLKNTKGSLTMTALKSLPCEARLIITATPVQNNL
GDMYTLVNFVCPGVLGDLTTFRREYERPITAVSNDRNCNADKKRQGKESSRILDGILKSL
MLRRLQKDVLNKVLPPRHTFLLFCQPTFSQREFYKTIATNQSSKSSGGQSPDALQALIGL
RKICTHPNLLKQTDVVPGGKKTYVEQNNNFESSGKLIVLNALIQEIRKEEPTDKIVIVSN
FTSTLTVIEDAILKPNKLNFLRLDGSISSADRQPLVDTFNRTNADMNFALTLSSKAGGVG
LNIIGANRLVMVDPDWNPATDIQAMARIYRPGQKKSCFIYRCFTSGTIEEVILQRQIQKG
TLANMTVDSAQKIGQRLNAEELKECFTLKEICVCDTRNKVGKKWPDYSK
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaagaaatagtttgtttctttcctggagctatcggtaatcccattgttcca
cattcaattaggaatgttttaaggccacaccaaattgaaggtgttgtatttttatggaat
tgtcttactggacatggcaatgtatcaaaagtttcaccacacgtttcttatactaccgaa
acaaccgatgaagatactagtatcaaggggtgtattctatgcgatgaaatgggtttggga
aagacatgcatgacaattgcgacgatttcggcgcttcatcgacagaaaagagatatatat
tgtttctcaccattatcatctggttgctcattcaatctctttctctctctatataggttt
gtggtagtatgtccctcttcactggtcaaaaactgggcacaggaatttgataagtggtta
ggaaatgtgggtcttccaaaacgagtggtagtcaaaaagggcggcgaagcaggacttcga
caaataaagtccttcaatacagtcaaaccaaataacacctctgaggtccttatcatttct
tacgacttgtttcgaatgaatgcaacagtccttgaaaatgtaaaaaatatggcacttctg
gtgatcgacgaaggtcatcggctgaagaacacgaaagggtccttgacgatgaccgcactc
aaatccctaccgtgtgaagctagattaattattaccgcaacaccagttcagaataattta
ggtgatatgtacacactcgtgaactttgtttgtccaggtgtattaggggatctcacgacc
tttcgacgcgagtacgaacggccgatcacggcagtctcgaacgatcgcaactgcaatgct
gataaaaagagacaagggaaagaaagttctcgaatattggatgggattctcaaatctctt
atgttacgacgtctccaaaaggacgtattgaataaagtcttaccacctcgtcacacgttt
ttactcttttgtcaacctacatttagtcaacgagaattttacaagaccatcgcgacgaac
caaagctcgaaaagttcgggaggtcagtctcctgatgcactacaagcactcattggactt
cggaagatatgtacacatccaaatcttcttaaacaaaccgatgttgtccctggtggcaag
aagacctatgttgaacaaaacaataattttgaatcatcgggaaagctaatagtattaaac
gctctaatacaagagattagaaaggaggaacccacggacaaaatcgtaatagtatccaat
tttacgagcacgttgactgtaattgaagatgctatactcaagcctaacaaattgaatttt
cttcgattagatggttccattagtagtgctgatagacagccactggttgataccttcaat
cggactaatgccgatatgaattttgcactcacattgagttcaaaagctggtggcgtgggt
cttaatatcattggggctaatcgactcgtcatggtcgatcctgactggaatccagcaaca
gatatccaggcgatggcaagaatctacagaccgggtcaaaagaagtcgtgtttcatatat
cgatgctttacatcaggtacgatcgaggaagtcattttacaaaggcaaatacaaaaggga
acgcttgcgaacatgacagtggatagtgctcagaaaatcggacagcgtttgaacgctgaa
gagctcaaggagtgcttcaccctcaaggagatatgtgtttgcgataccagaaataaggtt
gggaagaagtggcctgattacagtaagtga
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