Fragilariopsis cylindrus: FRACYDRAFT_196785
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Entry
FRACYDRAFT_196785 CDS
T04784
Symbol
RMLB4
Name
(GenBank) putative dTDP-glucose 4,6-dehydratase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00520
Amino sugar and nucleotide sugar metabolism
fcy01100
Metabolic pathways
fcy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
FRACYDRAFT_196785 (RMLB4)
Enzymes [BR:
fcy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
FRACYDRAFT_196785 (RMLB4)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
NXPE4_C
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
OEU08397
JGI:
196785
UniProt:
A0A1E7ERE2
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MADNDNDNNKRGSSSIGDDDDLESLEAKNKRTKLLVSSTSTSTSTTTNKCTRTQRFIEDQ
QLLASQSIPTHTTPYTMYTPKIVCDSSRLKILITGGAGFVGSHLVDKLMQVGHEIIVLDN
FFTGQKKNIEHWTHHPNFTVIRHDITEPILLEVDQIYHLACPASPPHYQYNPVKTIKTST
MGTLNMLGLAKRVKARILLASTSEIYGDPNIHPQPESYWGNVNTLGPRSCYDEGKRVAET
MMYAYKEQNNVEVRIARIFNTFGPRMHPNDGRVVSNFIIQALQNKDITIYGDGNQTRSFQ
YVNDLVEGLVKLMNSDYDGPVNIGNPDEYSIKNFAEQIKEMTSSQSKIIYLPKVADDPTQ
RNPDITTAKAKLNWSPQWHVKAGLAKAVEYFQAVLDMAGDDGIKPTGPEASKPKA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaatgataacgataataataaacgcgggagcagcagcatcggtgatgacgat
gatctcgaatcattagaagcaaaaaataaacgaacgaagttattggtcagtagtactagt
actagtactagtactacaactaataaatgtacacgaacacaacgatttattgaagatcaa
caattattagcgtcgcaatccataccgacacacaccacaccctatacgatgtatacacca
aaaattgtgtgtgattcctcacgtttgaagatcttaattacgggtggtgccggttttgtc
ggtagtcatttagtcgataaattaatgcaagtagggcatgaaattattgtcttagataat
ttttttactggtcaaaaaaaaaatattgaacattggacccatcatccaaattttacggtg
atccgacatgatatcacggaaccaattttattagaagtcgatcaaatctatcatttagcc
tgtcccgcctcaccaccccattatcaatacaatcccgtgaagaccattaaaacatcgacc
atggggaccttaaatatgttaggattagcaaaacgtgtcaaggcacgtattttattagcc
tccactagtgaaatatatggtgatccaaacatccatccacaaccggaatcctattgggga
aatgttaatacattaggaccacgatcctgttatgatgaagggaaacgtgttgcagaaact
atgatgtatgcctacaaggaacagaataatgtggaagttcgtatagcacgaatttttaat
acatttggtccaaggatgcatccaaatgatggtcgagtggtatcaaattttattattcaa
gcattacaaaataaagatataactatatatggtgatggtaatcaaacacgatcctttcaa
tatgtgaatgatttagtagaggggctggtgaaattaatgaatagtgattatgatggacca
gtgaatattggtaatccggatgaatactcgattaaaaattttgccgaacaaattaaagag
atgacctcgtcccaatcaaaaattatttatttaccaaaagttgctgatgatcccacacaa
cgtaatccggatatcaccacagcaaaagcgaaactgaattggtccccccagtggcatgtg
aaagctggtctggcgaaggcagtcgaatattttcaagcagtattagatatggcgggtgat
gatggtattaaaccaactggaccagaagcctccaaaccaaaagcatag
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