Fragilariopsis cylindrus: FRACYDRAFT_197114
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Entry
FRACYDRAFT_197114 CDS
T04784
Name
(GenBank) CBF-domain-containing protein
KO
K14771
U3 small nucleolar RNA-associated protein 19
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_197114
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FRACYDRAFT_197114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBF
YL1
Sigma70_ner
Tim54
CDC45
CCDC106
Cwf_Cwc_15
Nop14
SURF2
DNA_pol_phi
Nop53
Motif
Other DBs
NCBI-ProteinID:
OEU07822
JGI:
197114
UniProt:
A0A1E7EPB4
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MIPVPRSEEDLEGSHQFLFPPPSDAVPAEKSDDDEESEDDDEDGDSDSDDDDDDNSSSDD
EDNSEKNEVSSSIRPKKRQKTKKADNNNKFAFQQIRMFKREYKKAWLAVLRLPLPVTLLK
KALNFLPQNVLNYVAQPLRFADFFMEAYSDNNNSGGIIGVLALEGLFLLITKYGLEYSNF
YTQLYKLVSAKVMYAKYRARFFSLMTKCLVLNTMLPAHLVAAFIKRLCRCTLSGPPSGAL
FVLALVSNLLKKHPECSCLVQRKAGITEMEDCFLADEDDPVECRALQSSLWELAVFERHY
YSAVSTLAKSIGRAEEDKAPLYNVEEFAAHTYGSLFDQEKKKKNKTALTFKKPTSLFTED
DVFSGCIQIGDH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgttccacgttctgaggaagatttagaaggaagtcatcaatttttattccct
ccaccatcagatgctgttccagcagagaaaagtgacgacgacgaagaatcagaagacgac
gacgaagatggtgacagtgattccgatgatgacgacgacgacaattcttcgagtgatgat
gaggacaattcagagaaaaacgaagtatcatcatccattaggcctaagaaacgtcaaaag
acaaaaaaagcagacaataataataagtttgcatttcaacaaatacggatgtttaaacgt
gaatataagaaggcatggttggcagtactaagattacctcttcctgtaacattgttaaaa
aaggcacttaattttttaccacaaaatgtcttaaattatgtcgctcaaccattacgtttt
gctgattttttcatggaagcatattcggataataataattctggtgggattattggagta
ctagccttggagggtctatttttgttgattaccaaatatggcttggaatacagcaatttt
tatacacaactctacaaactggtatcagctaaagtcatgtacgctaaatatcgtgctcga
ttcttttctctaatgacaaaatgtttggtcctaaataccatgcttccggctcacttagta
gcagcgtttatcaaacgactctgtcgttgtacgcttagcggccctccctcgggtgcattg
ttcgtactagcgttggtttcaaatcttcttaagaagcatccggaatgtagctgtctcgtg
caacggaaggcaggtataacagaaatggaggactgttttttggccgatgaagacgatcca
gtcgaatgtcgagccttgcaaagctctctatgggaattggctgtatttgaacgtcactat
tattctgccgtttcaacactagcaaaatcaattggacgggcggaagaagacaaggccccg
ttatataatgtagaagaatttgcagctcatacgtacgggtctcttttcgaccaagaaaag
aagaagaaaaacaagactgcattaacatttaagaaaccaacgtcactcttcacggaggat
gatgttttttctggttgcattcagattggtgaccattag
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