Fragilariopsis cylindrus: FRACYDRAFT_205041
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Entry
FRACYDRAFT_205041 CDS
T04784
Name
(GenBank) translation initiation factor eIF-3b
KO
K03253
translation initiation factor 3 subunit B
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_205041
03012 Translation factors [BR:
fcy03012
]
FRACYDRAFT_205041
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
FRACYDRAFT_205041
Translation factors [BR:
fcy03012
]
Eukaryotic type
Initiation factors
eIF-3
FRACYDRAFT_205041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
RRM_1
IKI3
Motif
Other DBs
NCBI-ProteinID:
OEU22101
JGI:
205041
UniProt:
A0A1E7FVC1
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MADLAAEAEELDGYFSDASLDPEPRYPNLKESFDTAIVVLNLPKVPEAKRGKLEKVVTKI
ISRLGNLAANEDTGFTGFSMPFNAEKASTEGFCIVEYETPEEAKNAISVLNGYKFDKNHS
LIVSPYVRAQKLENLAEKEFVEPEQAPFEEKPNAMSWMEDSSQRDEYVIRQGKETIVSWF
DGKVDPIVDYDGSREKEAGVNWCEYYCHWSPKGSYLATLVPAKGVILWSGSTYEKVGRFV
ASDVKTVLFSPQENYILTNNMRYDDEQAIKVYEIQTGKLLRTFALYPDNIEREEEVPPPP
FQWSHDDSYLARMGKDLVSIYSTPSMRLLDKKSLLAEGIHEFQWSPKSNVLALWSPERNN
APAHVDLIEIPSRKKLRQKNLFNVSNCSMVWQNDGDYLAVKVTRHTKSKKTLYNNIELFR
LNEAGIPVEMLDMKDAVMSLTWEPRGSRFAMIHAENPSSTKVDVSFYDMMKKSETMKKVG
KKGALQKQTTLVPELNKIETLTGKQCNCLFWSPAGSTILMAGLGDSASGTLEFYDVDTKS
LTIKEHYRANQVLWDPDGRSVTTCVSQPVEGGHFKFAMDNGYILWSFQGKQLYQQSFETF
YQFEWRPRENLLSKPEIAKVRKELKKYEKQFEKADKDRARALYLEETKGKRQERKKIRDI
LSQLRELRREQRPRHIELLDGYDSDDDTNYVVREISIETILSTKEETV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggccgatctagccgctgaggcggaagaattggatggatacttttccgatgcatccctc
gatccagaacctagatatccaaacttgaaggagagcttcgatactgccattgtcgttctg
aacttaccgaaagtaccagaagccaaacgcggaaagttagaaaaggtggtaacaaaaatc
atttctcgtttaggaaacttagctgccaatgaagatacaggcttcactggtttctcaatg
ccattcaatgcagaaaaggcttccacggaaggattttgtattgtcgaatatgaaacacct
gaggaggctaaaaatgcgattagtgtactgaatgggtacaaattcgacaagaatcattcg
ctgattgtttcaccgtacgttcgtgctcaaaaattagagaatttggcagagaaagaattc
gtggaaccggaacaagcacccttcgaagagaaaccaaacgccatgtcatggatggaagat
tctagtcaacgtgacgaatacgtcatccgacagggtaaggaaaccatcgttagttggttt
gatggtaaggtcgacccaattgtggactatgacggttcacgtgagaaggaagccggtgtg
aattggtgtgaatattattgtcattggtctccaaagggaagttacctagcgacgttggta
cccgcgaagggagttattctctggagtggttccacatacgaaaaggttggacggtttgta
gcatcagatgtaaagacggtactattcagtccacaagaaaattatatccttaccaacaac
atgagatatgatgacgaacaggctattaaggtatatgaaatccaaacgggaaaactcctt
cgaacctttgcattatatcctgataacattgaaagagaagaagaagttcccccaccaccg
ttccaatggtcccacgatgattcttatcttgcacgcatgggcaaggatttagtctctatt
tactctacaccatctatgagattattggataagaaatctcttttggctgaagggatccac
gaattccaatggtcccctaagtcgaacgttttggctttatggtccccggaacgaaacaac
gctcccgcccatgtcgatctcattgaaattcctagtcgaaagaaacttcgacagaagaat
cttttcaatgtttccaactgctcaatggtatggcaaaatgatggtgactatttagctgtc
aaggtcacaagacatacaaaatcgaaaaagactctctacaataatatcgaactattccga
ttgaatgaagccggtattcctgttgaaatgcttgatatgaaggatgccgttatgtcatta
acatgggaacctcgtggatcgaggtttgctatgatccatgccgaaaatccttcctctact
aaggttgacgtctccttttacgatatgatgaaaaagagcgagacaatgaagaaagtaggt
aaaaagggtgcgctacaaaagcaaacgacattggttcctgagttgaacaagattgaaact
ttgacaggaaaacaatgcaattgtctcttctggagtcccgcaggttccaccatacttatg
gccggtttaggtgattccgcttctggaacattggaattctacgacgtcgataccaaatct
ttgacgatcaaggagcattatcgtgccaatcaagtactatgggatcctgacggtaggtcg
gtaacgacatgtgtgtcccaacccgtcgaaggtggtcacttcaaattcgctatggacaac
ggatacattttgtggtccttccagggtaagcaactctaccaacaatcctttgaaacattt
tatcaattcgaatggagacctcgagaaaatctcctgtccaagccggagattgctaaggtt
aggaaggaacttaagaagtatgaaaagcaattcgaaaaagccgacaaggaccgcgcaaga
gcactttatctggaagaaacgaagggcaaacgtcaagaacggaaaaagatccgagatatt
ctttcccaacttcgagagcttcgaagagagcaaaggcccagacacatcgagttgttggat
ggatacgacagtgacgatgataccaactatgttgtgcgagaaatttcgattgagactata
ttatctacgaaggaagaaactgtttaa
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