Fragilariopsis cylindrus: FRACYDRAFT_207566
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Entry
FRACYDRAFT_207566 CDS
T04784
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FRACYDRAFT_207566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_207566
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-60S particles
GTPases
FRACYDRAFT_207566
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
DUF4349
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
OEU17243
JGI:
207566
UniProt:
A0A1E7FHJ0
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MSSVFLPPDKTRLVTICAHVDHGKTTLADNLIESNGIISERHAGTLRYLDSTEEEQRRGI
TMRASAIGLRHRYTPSNAGSSSSSSSSSSSSSPIIVHLLDSPGHTDFSTEVSSSLQCCDG
CLLVVDAVEGMCARTHQVVREAHSHQLVPILIINKVDRLCTDLCLTPTEAYIRLRSLIES
VNAACAAMLVSKRAKRREDERVLNKKSGLLSKGDSNNWTFDAQRGNVVFASALFGWGFSV
PSLARSLFRNKILPIKPIMLKQYLFGDFYFKQQPSNGSNSNTDSNTGKMMKLKVTVENQN
QLPLFAEYGLQPLWEIYEGVAAAAAYCGLGSNIFSDGRIPATATFNNKSKGKIEIKATTP
GMDQVLQAMQAGSTMPESATSAADITSLDNLQQVMTRTGSSTSEEAVLRSLLRRYRPLSD
IVLNSVYEICPSPIQAAEDVRPRALAIMDSKERCADENNYEEEFTRIKVAIRSCDVSNDA
PAVAYVCKFMAADRSQIRDPGRIDDENDETSSTVILGLARVLSGRLKTSSTYHVMGPKHK
FNDPNIIRSRPIRLFLLMGSSFVLVDEVPAGHLCAIQNLEDVQYKTATISDSPYGMPLLG
FADMIQRPLVKVNVEAIDPADTYTLERGLVKLSLADAAVEVTATAKGERIVACLGELHLE
QSILDLQNIYCDKKGVQLRISEPIVEFGETTAWFDDNELDFEGFLSESRKQVPPLRQLTI
PPYNEEEGIEFSQRGRARSIVSGRVGAVSMRVVPLDPMIYEALKGGDVDEDCSDAINKLG
RALGFPKDQNAESILKVLADTVISVDDSGNAIVASSALESGTTVAGVLSEKDEIYVPNKL
ELGASAQSLEEDNGESKNDVCGLLEYEMVQRQIRDNGFLLNDAEKRKITSVDAAALEIWR
SQMKGSLIAGFQMAMRAGPICEEPVRSVLVILEGLEVALKEDKRSENEFKTASPLSGGMM
AAALRIGIRSALLSRPARLVECHLKLTLNSSFAGLGSLYPVLFKRRGKVLEDSMVDGTDL
LLISANLPHAESFGLAPELFRLSSGEVTAPEMIFSHWDILEQDPFWIPTSLEEREDFGEI
QSSGDVSTGMDNTALHYIRKVRERKGLLVDSSRTVIAAEKQRTIKR
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgtatttcttcctcccgataagacgcggcttgttacaatttgtgcacacgtc
gatcatggaaaaacaaccctggctgataatttgattgaatctaatggaattatttcagaa
cgtcatgctggaacacttcgatatcttgattcgacagaggaagagcagcgacggggaata
actatgagagcatcagcgattggtcttcgacatcggtacacaccatcgaatgcgggatct
tcgtcgtcatcatcatcgtcgtcatcgtcgtcgtctcctataattgttcatctacttgat
tctcctggtcacactgacttttcaaccgaagttagtagttcattacaatgttgtgatggt
tgtttgcttgtagttgatgccgttgagggaatgtgtgcacggacgcatcaagtagttcga
gaggcacattctcatcagctcgtcccaatattgattatcaataaagtggatcgactatgt
acggacctatgtttaacacctaccgaagcttatatacgattacgatccctaattgaatcg
gtaaatgcagcatgtgccgctatgctcgtatcaaaacgagctaaaagaagagaagacgaa
agagtattgaataagaaaagtggattattatccaagggggatagtaataattggacgttt
gatgctcaacggggtaatgttgtttttgcgagtgctttatttggttggggatttagtgtc
ccgtctcttgcccgatctctttttcgcaacaaaatcctacctattaagcctattatgttg
aaacaatatctatttggagatttctatttcaaacaacaaccatcaaatggtagtaatagc
aatacagatagcaatacagggaagatgatgaaactgaaggtcactgtagaaaatcagaac
cagctaccactttttgccgaatatggattacaaccattgtgggaaatatatgagggtgtt
gctgcggcagcggcatattgtggtcttggatcaaacatattttccgatggaagaatccct
gctaccgcgacatttaacaacaaaagcaaaggaaagattgaaatcaaagcaactacacct
ggtatggaccaagtactgcaggccatgcaagcgggtagtaccatgcccgaatctgctacg
agcgctgctgatattacatcactagataatttgcaacaagttatgacccgaacgggctcc
tctacgtccgaagaagctgtgttacggtctttgcttcggcggtatcgtccattaagcgat
attgtcttgaattccgtttacgaaatatgtccctctcccatccaagccgctgaggacgta
cgaccacgagcattggcaataatggattctaaggaaaggtgcgccgacgaaaacaattac
gaggaagaattcacacgaataaaagtggctattcgctcttgtgatgtttcaaatgatgcc
ccggctgttgcgtacgtgtgtaaatttatggcggctgatcggtcacaaattcgagatcct
ggtaggatcgatgatgaaaatgacgaaacttcatctaccgtcattttgggattggcacgt
gtcttgagtggtcgactaaagacgtcaagtacttaccatgttatgggccccaaacacaaa
tttaatgatccaaacataatacgtagtcgtcctatccgactctttttgctcatgggatcc
tcattcgtactagtagatgaagttcctgctggtcatctctgtgcaatccaaaatttggaa
gatgtacaatacaagacagcaactatcagtgatagtccatacggaatgcctctcctcgga
tttgcggatatgatacaacgtcccctagtcaaggtcaatgtcgaggcaatagaccctgcc
gatacttacacccttgaaaggggtctcgtgaaattgagtctagccgatgcagctgttgaa
gtaacggccactgcgaagggtgagcgaattgtagcatgtcttggtgagctgcatttagaa
cagtcaatactagacctacagaatatttattgtgataagaagggtgtacagttgcggata
tcggaacccatcgtggaatttggagaaacaaccgcttggttcgatgataatgaattggac
tttgaaggattcttgtcagaaagtaggaaacaagttccaccattacggcaattgacgatc
cctccctataacgaagaagagggaatagaattttcccaaaggggtcgtgcacgaagtatt
gtttcaggacgcgttggtgccgttagcatgagggttgtcccgctcgatccaatgatctat
gaagctcttaagggaggagatgtcgacgaagattgcagtgacgctataaacaaactaggt
cgagcgttaggatttccaaaggatcaaaatgcggagtctatcttaaaagtcctagcagac
acagttatttcagtagacgatagtggaaatgctattgttgcaagctctgcacttgaaagt
ggaacaacagttgcaggggtgctttctgaaaaagatgagatatatgtgccgaacaaactc
gaattgggcgctagtgctcaaagtctcgaagaagataatggcgaatccaaaaatgatgtt
tgtggtctattggaatatgaaatggttcagagacaaatacgtgataatggtttcctatta
aatgatgccgaaaaaagaaaaataacttctgtcgatgcagctgctcttgaaatctggaga
agccaaatgaagggttctctcattgcaggatttcaaatggcgatgcgtgccggacctatc
tgcgaagaaccagttcggagtgtattggtaatattggaaggcttagaagtggcgctgaaa
gaagacaagagatcagagaacgaattcaaaactgccagtccgctgagtggtgggatgatg
gctgccgcccttcggatagggattcgtagtgccttattatcgagaccagcacgattggtc
gaatgccacctgaaattgactctcaattcatcttttgccggtcttgggtctctatatcca
gttttattcaagaggagggggaaagtgttggaagattctatggttgacggaacggatttg
ttgttaatttctgcgaatcttcctcacgcggagtcttttggactggcccccgaactcttc
cgtctatccagtggagaggtaaccgccccggaaatgatattttcgcattgggatattcta
gaacaagatccattctggatcccaacatcactcgaagaacgcgaagactttggggagatt
caatccagcggagacgttagtacgggaatggacaatacagcattacactatattcgaaag
gttcgggaacgcaaagggctgctagttgactcgagtaggacagtcattgcggccgaaaaa
cagagaacgataaaacgatag
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