Fragilariopsis cylindrus: FRACYDRAFT_207674
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Entry
FRACYDRAFT_207674 CDS
T04784
Name
(GenBank) S-adenosyl-L-methionine-dependent methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_207674
Enzymes [BR:
fcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
FRACYDRAFT_207674
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Other ribosome biogenesis factors
FRACYDRAFT_207674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-ProteinID:
OEU17417
JGI:
207674
UniProt:
A0A1E7FGY9
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MSQIDDIESNFKELKHEEEERNGVLNQNSNTSKRSITIPRYVRINTLVADRDEVLQTIRK
KNAKVYIDAHIPNLLVLDHTPESRALLQELVVSQKVILQDKSSCFSALCLVHGFGDNNNG
SNNSKDNGYHYLDACAAPGNKTCHLAALVQAGKANDSRSSIIYALDKSPDRYKLLKRRMD
ELVPQRTVQCHNFDFFDDNIDNKLFKRIRAIMLDPSCSGSGMTTNHTENSINRDPLFSND
RIKTLSNFQFTALLHAATDFPHVDRIVYSTCSLYVEENEGVVQRLLTSTDDWELCAPICL
AGWHRRGLVTEDQAECLIRVHPGEDATNGFFVACFQRKSAGNKNSKPNKAGSKQSHFQPP
SENNIPEGMELYDNQFHCEEEKDESVPVNKKSNTKKSPTIVTPSNKSTAEASNKKSNIKK
LPARVPPSKSTAGASNNKRKVNEISSTDDAGDAGDVPTKTSGISAKKRAKKSEWKRKQRL
RKEDRLKLKNKE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaatagacgacatagaaagtaattttaaggaacttaaacatgaggaggaagaa
agaaacggtgttttaaatcagaatagcaatacgtcgaaaagatctattacaataccacgt
tacgtacgtatcaatacactggttgctgatcgagatgaagttttacaaacaatccgaaaa
aagaatgctaaggtatacatcgatgcacacataccgaatttattagtacttgatcataca
ccggaatcacgtgcgttattacaggaacttgtggtatctcaaaaagttattctgcaagat
aaatcttcctgcttttcagctctttgtttagtacacggatttggagacaacaacaatggt
tccaataatagtaaagacaatggttatcattatttagatgcgtgtgctgcgccaggtaac
aagacatgtcatttagcggcattggtacaggctggaaaagctaatgattctcgttcctct
attatttacgccctggacaaatcacctgatcgttataaacttttaaagcgtcggatggat
gaattggttccacagcgcactgtccagtgtcacaatttcgacttctttgacgataatatc
gacaacaaactatttaagcgtattcgagctatcatgttggatccaagttgttctggaagt
ggtatgactacgaatcatactgaaaattcaataaatcgtgatccattgttttcaaacgat
cgtataaaaactttaagtaactttcaattcacagcgctccttcatgctgcaacggacttt
cctcatgtggaccgcattgtgtactcaacttgtagtttgtacgtggaagaaaatgagggc
gtcgtccaacgtctattaacttcgacggatgattgggaattgtgcgcaccaatatgcctt
gcaggttggcatagacgtggattagtaacagaagatcaagcggaatgcttgattcgagtc
catcctggtgaagatgctactaacggtttctttgtggcttgttttcaacgaaaatcagcc
ggaaataaaaacagtaaaccaaataaagctggtagtaagcaatctcattttcaaccacct
tctgaaaataacattccagaaggaatggaattatacgataaccagtttcattgtgaagaa
gaaaaagacgaaagcgtgccagttaataaaaaatcgaataccaaaaaatcgccaacgata
gttacgccatctaataaatccacagcagaagcaagcaataagaaatcgaatattaaaaaa
ttgccagcgagagttccgccatctaaatccacagcaggagctagtaacaacaaacgaaag
gtaaacgaaatatcttctacagatgatgctggtgatgctggtgatgtgcctactaaaact
agtggtatttcagcaaagaaacgtgcaaaaaaatcggaatggaaacgcaaacagcggtta
aggaaggaagaccgcttgaaactcaaaaataaagaataa
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