Fragilariopsis cylindrus: FRACYDRAFT_207768
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Entry
FRACYDRAFT_207768 CDS
T04784
Name
(GenBank) Sec1-like protein
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
FRACYDRAFT_207768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_207768
Membrane trafficking [BR:
fcy04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
FRACYDRAFT_207768
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
SDA1_HEAT
Motif
Other DBs
NCBI-ProteinID:
OEU17553
JGI:
207768
UniProt:
A0A1E7FIF2
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MKVLLLDASTTQIVSAVYSQTEILSNDVYLVSRLDDTGAKQQQQQQSDKNKNKSSHLKAV
CFVRPTEISVGMLVRELKEPRFAEYHFFFSGILTQGLLRLLAESDSTERVKQVQEFYGDF
VPINDDLLTLQCRNTLSMSVAAGTSWAPQYSHLYERNLRGLQGMLLALKRQPLAGIRYAG
QSACAEELAKDIFDAISTDEIFHFRRRRRNTAGTLLLVLDRRDDPVTPLLSQWTYQAMVH
ELLGLNNHRVVLKGAPNIAKDLEEVVLSSCQDEFFCNNRHKNFGELGENIQKLLQDYQKQ
TANNTTNFNTIEDMQAFMDKFPELRSRSHNVSKHVAIMGELARLVGACSLMDVSQFEQEL
ACADDHTAHWRELMEKLDSPAVKIPDKLRLGLLYALRYETSGNINMVQQAMKKGGVPPDM
VNLVSVMLRYGGSKARGPGLYGDQNNIMSNLTKSFMTSVQGVQNVYAQHVPVLMDTIQSI
TKGKLRRDTHPFVPGSIKTVPGVSPDTVIPDEIIVFMVGGVTYEEGTKISEFNQTHRGKI
QVVLGGSTVHNSTSFLEELKMTK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtattattattagatgcatcaacgacacagattgtttctgctgtttattcacaa
acagaaatattaagtaatgatgtatatttagtttcacgattggatgataccggtgcaaaa
caacaacaacaacaacaatcagataaaaataaaaataaatcatcacatttgaaagctgtt
tgttttgttagaccgacagaaatttctgtggggatgcttgttcgtgaattgaaagaacca
agatttgctgaatatcattttttctttagtgggatacttacacaaggtttattacgatta
ttagctgaatcagattcaacagaacgagtgaagcaagtacaagaattttatggtgacttt
gttccaatcaatgatgatttattaacattacaatgtcggaatacattatcaatgtctgtt
gcggctggtacatcctgggcaccacaatattcacatctatatgaacgtaatttacgtgga
ttacaggggatgttgttggcacttaaaagacaaccattagcagggatacgttatgcagga
caatctgcgtgtgccgaagaacttgctaaagatatatttgatgctatatcaacagatgaa
atattccatttccgaagaaggagaaggaatacagctgggacattattattagttttagat
agacgagatgatccagttacaccgctgttaagtcaatggacgtatcaagcaatggttcat
gaattattaggattaaataatcatcgtgttgtattgaagggtgcaccaaatattgcaaaa
gatttagaagaagtcgtattaagctcctgtcaggatgaattcttttgcaataatcggcat
aagaattttggtgaattaggtgaaaatatacaaaaacttttacaggattatcaaaaacaa
acagcaaacaatacaactaattttaatacaattgaagatatgcaagcatttatggataaa
tttccagaattacgatcacgatcacataacgtatcgaagcatgttgcgattatgggtgaa
ttagcacgacttgttggtgcttgctcattaatggatgtttctcaatttgaacaagaattg
gcctgtgctgatgatcatacagcacattggagagaacttatggaaaaattagattcaccg
gctgttaaaattcctgataaattacgactgggattattgtatgcacttagatatgaaaca
tctggtaatatcaatatggtccaacaggcaatgaaaaaaggtggtgtaccacctgatatg
gttaatttagtttctgttatgttacgttatggtggaagtaaagctcgtggtcctggtctg
tacggtgatcagaacaacataatgagtaatttaacgaaatccttcatgacgagtgttcag
ggtgtacagaatgtatacgcacagcatgttcctgtattgatggatacgatacaatcgata
acaaaaggtaaactacgtcgtgatacacacccattcgttcctggatcaattaagacagtt
cctggtgtgtcacccgatactgttataccagatgaaattattgtttttatggttggtggt
gtcacatacgaagaaggtacaaaaattagtgagttcaatcaaacacatcgtggtaagatt
caagtagttttaggaggtagtactgtacataacagtactagttttcttgaagaattaaaa
atgacaaaatag
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