Fragilariopsis cylindrus: FRACYDRAFT_208366
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Entry
FRACYDRAFT_208366 CDS
T04784
Name
(GenBank) SNF2_N-domain-containing protein
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_208366
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
FRACYDRAFT_208366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
DEAD_2
AAA_19
AAA_14
Motif
Other DBs
NCBI-ProteinID:
OEU16596
JGI:
208366
UniProt:
A0A1E7FEN0
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MCKACPDVTLSKYQLIGVNWMRLLNGMTCETQKGTKNVNGVLADEMGLGKTVQTIAFLAW
LKYLNRSLPHLIVVPVSTLPNWIREFEKFCPEMSVFKYHGSQKEREELKENLREHLPKNY
NHKMSPQNQLDVIVAPVSYFQKENSPDRKFLSSFKYDYLVIDEAHNLKNAKSIRYKMLDK
VKSEHRLLLTGTPVQNNPQELLNMLSFIMPLFSSAGKSFDDQDNYTEQMLKHFVDDNIEN
GDEQTAYKKLKQLFAPFVLRRKKDEVIAQLLPKKERKTVFVELCSGTRDIYQSIISDHLN
KSDTKINHTLGENLFTNLRKCAHHPLLLRNRWKSGSEIEHLTNYFHKYDLFCSAKFESLR
KLLPGLISDDHRILIFSSWTSCLDLLGCLMDYLKLKFQRMDGSTTSDDRQRLIDRFNTDR
SYDVFLLSTKACGLGINLTSADVCILHDLDFNPFNDLQAEDRCHRIGQKRPVTVYKLIAL
NTVDEDIYKMQEKKAKMNAAIMDSSSSRKEKNDILKSVLKKAKCNGENDSDCEII
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaggcatgcccagatgttaccctaagtaaatatcaactaattggtgtcaattgg
atgagattacttaacggcatgacttgtgaaactcaaaaaggtaccaagaatgtcaacgga
gtcttagcggatgagatgggtttgggaaaaactgtccaaactatcgcttttttagcatgg
ttaaaatacctaaaccgatccctaccacatttgattgttgtgccagtgtctactctacca
aattggatcagagagttcgaaaaattctgtccagagatgtcagtattcaagtatcatgga
tcgcaaaaagaaagagaagaactgaaggaaaatctgagggaacatcttcccaaaaattat
aaccataaaatgagtcctcaaaatcaacttgacgttattgttgcaccagtttcttacttt
cagaaggaaaactctccagatcgaaaattcctgagcagtttcaaatacgattatttagtt
atcgacgaagctcacaacctaaagaatgccaaatccattcgttacaaaatgctagacaag
gttaaatctgagcatagactacttctgactggaactccagtgcagaataatccgcaagag
ctgttgaacatgctttcgtttattatgcctctcttttcgtcagccgggaagtccttcgat
gaccaggacaactatacagaacaaatgttgaaacattttgttgatgataatattgagaat
ggagatgaacaaacagcatataagaaactcaaacaattatttgctcccttcgttttacgc
cgaaagaaagacgaagtcattgctcaacttctccccaagaaagaaagaaaaactgtattt
gtcgaattatgtagtggaactcgagatatctatcaatctattatttcagaccacttaaat
aagagtgatacaaaaatcaatcatacacttggggagaatttatttacgaacctaaggaaa
tgtgcacaccatcctctccttttaagaaaccgttggaaatctgggagtgaaattgaacat
ttgacaaactatttccacaagtatgatctattttgttctgccaagttcgaaagtcttcgt
aaattgctacccggtctaatctcagatgatcatcgtatcttgattttttcgtcatggaca
tcatgtcttgacttgcttgggtgtttaatggactacttgaaacttaagtttcagcgaatg
gacgggagcacaacctcagatgatcgccaaaggctgatcgatcgattcaatactgacaga
tcctacgatgtgttcttattatcgacgaaggcttgtggtttaggcattaatcttacctca
gccgatgtttgtattcttcatgatcttgatttcaatccatttaacgacctacaagctgaa
gaccgatgccatcggattgggcaaaaacgaccagtaactgtatacaagctcattgccttg
aatacagtagacgaggacatttataagatgcaagaaaagaaagcaaagatgaatgctgct
ataatggattcgtcttcatctagaaaagagaagaatgatattttaaagtctgttcttaag
aaagcaaaatgcaacggcgaaaacgatagtgattgcgaaatcatttag
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