Fragilariopsis cylindrus: FRACYDRAFT_208417
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Entry
FRACYDRAFT_208417 CDS
T04784
Name
(GenBank) ABC transporter-like protein PnATH-like protein
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_208417
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
FRACYDRAFT_208417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
AAA_28
AAA_23
AAA
AAA_14
AAA_15
AAA_24
AAA_22
AAA_16
RNA_helicase
RsgA_GTPase
AAA_33
MMR_HSR1
TsaE
AAA_5
AAA_7
ATP_bind_1
NB-ARC
nSTAND1
HEAT_Maestro
SRPRB
ATG1-like_MIT2
Motif
Other DBs
NCBI-ProteinID:
OEU16658
JGI:
208417
UniProt:
A0A1E7FEQ2
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MLEKLSQDEIVVTYESRKGKLDPNARNINVSGVTVSFHGKPLIEETNLVINYGNRYGFIG
PNGSGKSTVMKAIAARAIPIPENLDIYFLDCEYPARDDITALEAVMESNNEIQQLEAKAE
LLNEAMADADEEGQMKIQQTMEGIYSRLDQLDASSAESRATQILFGLGFTVSMQHQKTKE
FSGGWRMRVALARALFIQPEFLLLDEPTNHLDMEAVLWLEDYLSNWDKILFFVCHSQDFM
NSVCTHIVRLDMTYKKLRYFSGNYDTYCSTRRDQDMVQMRQYESEQRDINEIKDFIARFG
HGTVKMVRQAQSREQLLKKKLEAGLTELPEQDPDYNWDFPDAGELAVPVLAVENLSFAYP
GGVELYSKVDFGVDLQTRVALVGPNGAGKTTLVKLMTGDLNPTKGAVKRNTHLRISRFTQ
HFEEKLDLSMTPMDFFKQKVMPKATIEKIRPWLGRYGCTGDQQSQVMDQLSAGQKARIVF
AIIAHERPHLLMLDEPTNPLDMESIDALAKCINNFKGGVLMVSHDMRLISQCAQQIYVCD
HKKVSLYRGDIMNFKLHQKKENAKNLAQHMNG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagaaactctcccaagacgaaattgttgtcacgtacgaatctaggaagggaaag
ttggacccaaatgcacgtaatatcaacgtaagcggcgtaaccgtgtcattccacggaaag
cctttaattgaagagacgaatctcgtgattaattacggtaatcgatatggattcatcgga
ccaaatggaagtggtaaaagtacagttatgaaggcaattgctgcacgtgctatccccata
ccagaaaatttagatatatactttttggattgtgaatatcctgctcgtgacgatatcacg
gcgctcgaggctgtaatggaaagtaacaacgagattcaacagctagaagcgaaagctgaa
ttgcttaatgaagctatggcagatgctgacgaagaggggcaaatgaaaattcagcaaact
atggaagggatctacagtcgattggatcaactagacgcaagttctgctgaatctcgagca
actcaaatcttattcggtttgggttttacagtgagtatgcagcatcaaaaaacaaaagag
ttcagtggaggatggcgaatgcgtgttgcactcgcacgggccttgttcattcaaccagaa
tttttactcctcgacgaacccacaaatcacttggatatggaagctgttctgtggcttgaa
gattatctatcgaattgggacaaaattctattctttgtttgtcattcacaggatttcatg
aattcagtgtgcactcacatcgttcgtctcgatatgacgtacaaaaaactaagatatttc
agtgggaattacgacacgtattgctcaacacgccgtgatcaagatatggtgcaaatgcga
caatacgaatctgaacagagggatatcaatgagatcaaagatttcattgctcgtttcggt
cacggtacagttaagatggtccgtcaggcgcagtcacgagaacagttgctaaagaagaag
ctcgaagctggtttgacagaactacctgaacaggatcctgactataattgggattttcct
gacgctggagagctagcagtaccggttttagccgttgaaaatctgagttttgcatatcca
ggtggagtagaactgtacagtaaagtcgactttggagtcgatcttcaaacacgtgttgca
ttggtggggccgaatggtgctggaaaaacaacactggtcaaactcatgacgggtgatttg
aatccaactaagggagctgtaaaacgaaacacgcatctgcgaatctcccgtttcactcag
catttcgaagaaaaactcgatttgtctatgacaccgatggattttttcaagcagaaggtc
atgccaaaggcgacaatcgaaaagatccgaccttggttgggaaggtatggttgtactggt
gatcaacagtctcaagttatggatcaactctcagcgggtcagaaagctcgaattgtgttt
gctatcattgcgcacgaaaggccccatttacttatgctggacgaaccgacaaatccttta
gatatggaatcgattgacgctcttgctaaatgtatcaataactttaagggaggtgtattg
atggtgagtcatgacatgagattgatctctcagtgcgctcaacaaatttatgtctgcgac
cacaaaaaagtgtcactatacaggggtgacatcatgaatttcaagctccatcagaagaaa
gaaaacgccaagaatctggcacagcatatgaacggataa
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