Fragilariopsis cylindrus: FRACYDRAFT_208519
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Entry
FRACYDRAFT_208519 CDS
T04784
Name
(GenBank) RNA-binding domain-containing protein
KO
K13207
CUG-BP- and ETR3-like factor
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fcy03041
]
FRACYDRAFT_208519
Spliceosome [BR:
fcy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
FRACYDRAFT_208519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-ProteinID:
OEU16853
JGI:
208519
UniProt:
A0A1E7FGE6
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MVVPPQQVYVQQQQQQVPLEAQFQSLGLGTNEGNDDEHQQNSTITDGQIDVGINEKGENI
VNSGDEQQEGDIDETENGEGEEEPIKLFVGQVPKTMNEEDIFPTFDSFGPLKDVSIIRDK
QTQLHRGCAFVTYWSSNDADKAQESLHGQHVFPGARRPAQVKPAEPSVPENKLFVGMLSR
KAGEDEIRELFAPFGEIREIYMIRNADGSSKCAAFLRYIDRDSAIQAIEMLHNNLVLEGA
ARPLIVKFADNKHQRQQRHMRNVRRQELMTVMGPGVGYPGIYPGHHMAMAPLPGAPSHQY
PPHHQMGGPPHAHHLPQYHGAPYPGGPGGGGPPAMYNPMYPSPQHYGGPPHPYGAGGFQD
PNQNNRQGSHGSAGGGNRHHNNQNNQNVNNVNANNPNQAANPRPREGPAGANLFVYHLPH
DLTDADLATAFNPFGNVISAKVYVDRYTDESKGFGFVSYDSVISAESAIEQMNGFQIGNK
RLKVQHKRVHNNGGGNSGGGPGPRMIHHEHYQQQQQQQQQQFEQQMHQVLPLDYAPPDDG
YDVVSDAPGPVIQGDVPPPTSQIGGIATPIPVMTP
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcccacctcaacaggtttatgtccaacaacaacagcagcaggtccctttggag
gcacaatttcaatcattggggttggggacaaatgaaggcaatgacgatgaacatcaacaa
aatagtactataactgatggtcaaattgatgttggtatcaacgaaaaaggagagaatatc
gtcaatagcggagacgaacaacaagaaggggatattgatgagacagagaacggcgagggt
gaagaggaacctatcaaattatttgtaggacaggtccccaaaacgatgaacgaagaggat
atttttccaacctttgatagtttcggtccactgaaagatgtttcgattattcgtgataag
caaacacaattacatcgtggttgtgcatttgttacctactggtcatcgaatgatgccgac
aaagcacaagaatcacttcatgggcaacatgtatttcccggtgcacgtagaccagctcaa
gtgaaaccggctgaaccttccgtccctgaaaataagctcttcgttggtatgttatcgcga
aaagctggtgaggatgaaattcgtgaactctttgctccgtttggagaaattcgagaaatt
tacatgatccgtaatgctgatgggtctagcaagtgtgcagcatttttacgatacatcgat
agagattctgcgattcaggcaattgaaatgcttcataataatctcgttttggaaggcgcc
gctcgaccacttattgttaaatttgctgataacaaacaccaacgtcaacaacgacacatg
aggaatgttagacgacaagaacttatgacagtaatgggaccaggagttggctatcctgga
atatatccaggccatcacatggctatggcgccactacctggtgctccatctcatcaatat
cctccacaccatcaaatgggaggacctcctcatgctcatcatcttcctcaatatcacggt
gccccctatcccggtggtccaggaggcggcggaccacctgcaatgtataatcctatgtat
ccttctccacaacattacggaggtccaccgcatccgtacggagcaggaggctttcaggat
ccgaatcagaataataggcaaggttcgcacggttcagcgggaggaggaaatcgtcaccac
aacaatcagaataaccaaaacgttaataacgttaatgctaacaatcctaatcaagctgct
aatcctcgtccgcgtgagggtccggctggagccaacttgtttgtttatcacttaccacat
gatttgaccgatgccgacttggcaacagcatttaatcccttcggaaatgttattagtgcc
aaggtctatgttgatcgttataccgatgaatcaaagggttttggctttgtttcatacgac
tcggttatttcggccgaatccgccattgaacagatgaatggatttcaaatcggtaataag
cgtctgaaggtgcagcataagcgtgtgcacaacaatggagggggtaatagtggtggagga
ccgggtcctcgaatgattcatcatgaacattatcaacagcagcagcagcagcaacagcag
caatttgagcaacaaatgcaccaagtacttcctctcgattatgcaccacccgatgatggt
tatgatgttgtatctgatgctcccggtcctgtaatccaaggtgatgtaccacctcctact
tctcaaattggtggcattgcaacgcctataccagtgatgactccctaa
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