Fragilariopsis cylindrus: FRACYDRAFT_208793
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Entry
FRACYDRAFT_208793 CDS
T04784
Name
(GenBank) WD40 repeat-like protein
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
FRACYDRAFT_208793
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fcy01001
]
FRACYDRAFT_208793
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_208793
Enzymes [BR:
fcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
FRACYDRAFT_208793
Protein kinases [BR:
fcy01001
]
Serine/threonine kinases: Other
VPS15 family
FRACYDRAFT_208793
Membrane trafficking [BR:
fcy04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
FRACYDRAFT_208793
Autophagy
Autophagosome formation proteins
PI3K complex
FRACYDRAFT_208793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS15-like_hel
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
HEAT
Beta-prop_TEP1_C
EIF3I
HEAT_2
Tti2
TOR1L1_N
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Pkinase
Vac14_Fab1_bd
Adaptin_N
RTP1_C1
Beta-prop_IP5PC_F
Beta-prop_VPS8
NBCH_WD40
Beta-prop_DCAF4
DUF3717
Motif
Other DBs
NCBI-ProteinID:
OEU15239
JGI:
208793
UniProt:
A0A1E7FAR2
LinkDB
All DBs
Position
Unknown
AA seq
1591 aa
AA seq
DB search
MWVFFDDHESEAERNGGVSDSTTDTSQNISSTSDAAAKGNPDGVLYYQQRELSRVFRALK
DNHNFAPFLYWKAGPAVSNNSNNSFVTNNISNYNTGNAIAVRPAVLVRPYFYTTLSDRLA
SRPFLDAVEKLWIVYQLLRALDDLHNSASSTDDGKIMPIVHGFLTTENVGLSSWNWVVLL
DLSASYKGRTALPDDDPSEYLYYFQERQTTAQSNATSQNIPDASTTTREKRCYLAPERFF
TPGNGQSNKSAHDKKGEEFESSETIETSASSSSSTKITAQTLTPAMDIFSAGCCIMETFL
NGERAFDLGDLMEYRQRKTYTPTLEQKLNKIEFSSLRAACKHMLSLDPSQRLSAREYLDR
LEASGLLPSSFDTLERLMKEVTTNTSSSSIPPHRDIEQNELEPDTGVVVNPDARLAKAAA
CYATILYETTGIFDEDGKKYFEKVLGQTAVANTIMNGNNQEINKKLSEVEIISPVTTEEK
KESDQDTLFAETDALLKKLESLTVFDEVEVVSIASEEAMSFTHQSKEFDEQNGNKISKVT
DKGKVRRSQLSESSLLIYLQLVLSTVRHVQRPASKLVALQLMNRVGKHSTDEAKLQRIVP
VVVSLLQDQDPLVRASAVEVLTSIMSIVESFPPSDSKVFPQYIFKRVAHLVTDPSLVVRL
AFARSVAVLAETAHRFLDISHAVRLYEAVGGGGDGRRGGSTATSQNKKVSASSSNVFGDE
VAKLLGESASIKKDNPKTLSRTDSTETIGSDIMGAGRILISSAYSSDLGALHETVSRWVI
HITTDASEHSSPAKRALLNDMARLCNFFGLDGVMAFILPQILSFLNDRKDWQLRASLFEH
LQSVCQSIGRAATEHFVLPILETALVDSEEVVISRALHCISELLRMGLLSRGVFLGRLAQ
GGSDESPGYIVGPLDSEVFVVPIIRLFLRFPPSSGHLSTPQGLEKCLYPAWTRERFEKEL
NRLIAAMEASPTGSLKLAQKIKFPRQDIPGSPSATLPSWYGTLLESQYGQVENVRETAAI
RSVSALGKIYGLSIMDQQTEVNSTSSDMTADRAIESLQSRKSKTIEAACRGEWGSETCLD
PALTDTSLLLTKLNALNVPPLPPRLSEEKSPIQRPSHPSRQYAREAGDPRDYSQAWKPKI
DNVIATSRRAPDVGHTAPVIRLAVSHDQRFFVSGSHDGTCRVWEAEKAEKSNGVLESSLT
YSMSNTDVDRKRVNDLVMIEGSHSVASANSDGSVHVWRVDLVSSSSRNLTDANKDTRRVA
GSTEIKRINPSEGEILAVNQFNNQGSSLLTFATQKYIHSWDLRCANEPFCLKNFQDTGYI
TNMAIGSDRNWVVVGTNRGFISLWDLRFQQMMKLWHHSRSSPINRLATSFVPPPQSWVNK
GSTSIESKPYIFVASGPNECGMFDVTTGHCSECFRTVEYGSRSPSSRIDGLPRLTEMPLS
TPVRRKTLLSQGIGSAKLSDVISSSFQSVNCMVGSTGNSDQSFLITGGCDRRIRYWDFSM
PSKCHVTNGLDAVQSRPSFERIDYNNNSRLMLCRQAPAPTLSETGSSKTPRKLFQGTRTL
PQCHNDSICDLKFLKNSLLSCSRDCTVKLWR
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtattttttgacgatcacgaaagtgaagctgaacggaacggtggagtatctgac
tctaccacggatacgagtcaaaacatatcatctacttctgatgcggctgcgaaagggaat
ccagacggggttttatattaccaacaaagagagctatctcgagtgtttcgtgcgctcaag
gataatcataattttgctccctttttatattggaaggccggaccagcagtaagcaacaat
agcaataactctttcgtcacaaacaatatatcaaactataatactggaaatgctattgcg
gtccggcctgctgtattagttcgtccctatttctacacaacgttatcagatcgattagct
tcaaggccgtttttggacgcagtagaaaagctgtggatcgtctaccaacttttgcgagca
ctggatgatttacacaacagcgcatcgtcgaccgacgacggtaaaataatgccgatcgtt
cacggatttttgacgacggagaacgtcggactgtccagctggaattgggtcgtcctcctg
gatctatcagccagttataagggaaggactgctcttcctgatgacgatccatccgaatat
ttgtattattttcaagaacgacaaacaacggcacaaagcaatgcgacatcgcaaaatatc
ccagatgcttcaacgacaactcgagaaaaacgctgttacctcgcaccagagcgctttttt
acacccgggaatggccaaagcaacaaaagcgctcacgataagaaaggggaagaattcgaa
tcttcggaaacaatagagacatcagcatcgtcttcgtcgtcgacgaaaattaccgcacaa
acacttactcccgctatggacatattttccgctgggtgttgtatcatggaaacatttttg
aacggagaacgtgccttcgatttgggcgatttgatggaatatcgacaacgcaaaacatac
acaccgacgctggaacaaaagctgaacaagatcgaattttcatctttacgagcggcctgc
aaacatatgttgtcattggacccgtcacaacggttgtcggccagagaatacttagaccgt
ttggaggcatctggtttgctgccatcctcgttcgatacattggaacgattaatgaaggaa
gtgacgacgaacacgagttcgagtagtattcctcctcatcgagatattgaacaaaatgaa
ctggaaccagatacaggagtggtagtgaaccctgacgcgagactcgctaaggcagcggct
tgctacgcaactatcctatacgaaacgacggggatttttgacgaggatggtaaaaagtat
tttgaaaaagtgttaggacaaacagcagtagcaaatacaattatgaatggaaataatcag
gaaatcaataaaaaactcagtgaggttgaaattatatcacccgtaacgacagaagaaaag
aaggagtcagatcaagatactctttttgcagaaacagatgcattgctaaagaaactagaa
tccctaactgtttttgacgaggtcgaagtcgtgtctattgcttcagaggaggctatgagc
tttacccaccaatcaaaggaattcgacgaacagaacggcaataaaatatcgaaagttaca
gacaaaggcaaggtgaggagatcgcaactatcagaaagctcattgcttatatatttgcaa
ctcgttttatcaaccgtcagacatgttcagcgccctgcgagtaaactggtggcacttcag
ttaatgaatcgagtaggtaaacactctacggatgaagccaaactgcaacggatcgttcca
gtcgtggtgtcgttgttgcaggatcaagatccgttggttcgcgcttctgctgtagaagtt
ctaacgtcaataatgagcatcgtcgaaagctttcctccatccgactcgaaagtatttccc
cagtatatcttcaaaagagtagcccatttggtcactgatccttcattggtagtacgttta
gcttttgcccgtagcgtggctgtgttggcggaaactgctcatcgattcttggacatatcc
catgccgttcgattgtatgaagctgttggtgggggtggagatgggagaagaggagggagc
acggcgactagtcagaataaaaaagtaagcgcttctagcagtaatgtgtttggggatgag
gttgcaaagctactcggggaatccgctagtatcaagaaagacaaccctaaaacgctgagc
aggactgattctactgaaactattggctctgatatcatgggtgcaggaagaatcttgatc
agcagtgcatatagcagtgatcttggtgcccttcatgaaacggtatctcgttgggtaata
catattacaacagatgcgtccgaacattcatcgccagccaaacgagcactactaaatgac
atggcgagactttgtaatttttttggtttggatggtgtgatggctttcattctgccacag
atattatcattcctcaacgatagaaaggattggcagcttcgagcttccttgtttgaacat
cttcagtcggtatgtcaatccatcggacgagcggcaactgagcattttgtgttaccaatt
cttgaaacggcgcttgtagatagcgaagaagttgtgattagtagagctctacactgtata
tcagaactacttcgtatgggacttctctcacggggagtttttctcgggagacttgcacaa
ggcgggtctgacgaatcaccagggtatatagtcggacctttagattcagaagtctttgta
gttccaatcattcgtttatttctacgatttccgccgtcttcaggtcatctttctactcca
caaggtctggaaaagtgcctttacccagcttggacccgtgaacgatttgagaaagagctc
aataggctaatagctgctatggaagcgtctcccactggctcattaaaactcgcccaaaag
ataaagtttcctcgtcaagacatcccaggttcgccatcagcaactcttccttcttggtac
ggcactctacttgaatcacaatacggtcaagtagaaaatgtacgcgaaacggctgctatt
cgatcggtttccgcgttgggaaaaatttacgggctgtctattatggatcaacaaacagag
gttaattcgacgtctagtgatatgacagctgatcgtgctatcgaatctttacagtcacgt
aagtcgaaaacgattgaagctgcttgcagaggagagtggggatcagaaacatgtttagat
cctgctctcactgacacttctttgttattgacgaagctgaatgcactaaatgttccaccc
cttccaccaagattgagtgaagaaaaatctccgatccagagaccttctcatccgtcgaga
caatacgcaagagaagcgggcgacccgcgtgattattctcaggcatggaaaccaaagatt
gataatgtgatcgctacatcaagaagagctccagatgttggtcatacagcaccagtaatt
cgtcttgctgtatcccatgatcaaagattttttgtttcgggaagccatgacggaacctgt
cgagtctgggaggctgaaaaggccgaaaaaagcaacggcgtactcgagagtagtttgacg
tactctatgagtaacaccgatgttgatagaaaacgagtgaacgatttagtcatgatagaa
ggaagtcattctgttgcttctgcaaatagtgatggctctgtccatgtgtggcgtgttgac
ctggtttcttcctcttcgagaaatctaacagatgctaataaagatacgcgaagagtggct
ggctcgacagaaataaaaagaattaatccgtcagagggagaaatactcgctgtgaatcag
tttaataatcaaggttcgtcactccttacattcgctactcagaaatatatacattcgtgg
gatttaaggtgtgcaaacgagccattttgtcttaaaaacttccaagatactgggtatatt
actaacatggcaataggaagtgatcgtaattgggttgtggtgggaacaaatagaggcttt
atatcgttgtgggatttgcgcttccaacaaatgatgaagttgtggcatcacagtcgttcg
agtcctatcaatcgtcttgctacctcatttgtacctcctccccaatcttgggtaaacaag
ggatcaacgagcattgagtcgaaaccatatatttttgttgcctctgggcccaatgaatgc
gggatgtttgatgtgacaactggacactgtagtgaatgcttccggacagttgaatacgga
agtcgaagtccatcatcaaggattgatggactcccaaggttgactgaaatgccactatct
actcccgtacgacggaagactcttttatcacaaggaattggatcggcgaagctttctgat
gttatctcttcttcctttcagtctgtcaattgcatggtcggtagcactggtaatagcgat
caaagctttttaataaccggtggatgtgaccgtcgcatcagatactgggatttttcgatg
ccttcaaaatgtcatgttacaaatggtctcgatgccgtgcagtcgcgccctagttttgaa
cgaatagattacaacaacaattctcgattaatgctgtgccgtcaagctccagctcccaca
ttaagtgagactggttcttctaaaactccaaggaaattattccagggaacccgcacgctg
cctcaatgccataacgattcaatctgtgatttaaaattcctaaaaaacagcctactaagc
tgctctcgtgattgtacagtaaaattatggcgataa
DBGET
integrated database retrieval system
