Fragilariopsis cylindrus: FRACYDRAFT_209461
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Entry
FRACYDRAFT_209461 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FRACYDRAFT_209461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcy03021
]
FRACYDRAFT_209461
Transcription machinery [BR:
fcy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
FRACYDRAFT_209461
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
SCPU
Tau95
DUF3591
YfbK_C
Motif
Other DBs
NCBI-ProteinID:
OEU14721
JGI:
209461
UniProt:
A0A1E7F962
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MSSPEAGTDYINDNDNESIDKVTANSYGNLDLVDSEKECWMIRIPPKLASAWEDCPPGSV
LGELVFRKGEKGKGPNLKKIKPSLEVDVDPNVANGSIGNGGPTSSSQQQQQLPLHYSLQA
MTKKLPTLHPFSRNANGSVKIHGKVSRTANLQVVQDAKYRALCKSRILSTTVHNQRFVKP
VDSNQSTGANTNKNKHMSTASNSTAKQGFGDAVHLFGKRLMESQQQQAAAYKLALSTGQG
RNGNKRRRFAPEEPVKSIIFQLYEDKPYWTTKDLRAASGGRPETEIKKVLQEIAIYHRSG
EQKNTWELKKEYQGGAGK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacccgaagctggtacggattacattaacgacaatgacaacgaaagcatcgac
aaagtaaccgcgaattcgtacggcaatttggatctcgtagattcagaaaaagaatgttgg
atgataagaattccacccaaattggcctcagcgtgggaggattgccctccagggagcgtt
cttggagaactcgtgtttcgcaaaggtgaaaaaggaaaaggtcctaatctcaaaaaaata
aaaccgtcgctggaggtagatgtcgatccaaacgtcgcgaatggaagcatcggtaatggt
ggtcctacaagtagtagtcaacagcaacaacaacttcctcttcactactctttacaggcc
atgacgaaaaaattgcccacactccatccattcagcagaaatgccaacggttccgttaaa
atacacggaaaagtttctaggactgcaaatctacaggtcgtccaagacgccaaatatcgt
gccttgtgcaagagccgcatcctgagcacaactgttcacaaccaacggtttgtaaaaccg
gttgatagcaatcagagtaccggcgcaaacaccaacaaaaacaaacacatgagtaccgca
tcaaattctactgccaagcagggtttcggtgacgccgttcacttatttggaaagcgacta
atggaatctcagcaacaacaagccgctgcttacaaacttgctttgtctactggacaaggt
cgcaatgggaacaaaaggcgtcgattcgcaccggaggaaccagtgaaatcaattatattt
caattgtacgaagacaaaccatattggactactaaagatttacgagcggcatctggtggt
cggcctgaaactgagatcaaaaaggtgttgcaagagattgcgatctatcatcgctccggt
gaacaaaagaacacttgggaactcaaaaaagaataccaaggtggcgctgggaagtaa
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integrated database retrieval system
