Fragilariopsis cylindrus: FRACYDRAFT_211063
Help
Entry
FRACYDRAFT_211063 CDS
T04784
Name
(GenBank) carotenoid oxygenase
Organism
fcy
Fragilariopsis cylindrus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPE65
Motif
Other DBs
NCBI-ProteinID:
OEU12365
JGI:
211063
UniProt:
A0A1E7F2Y4
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MNSFLLYCLAFAVTLKCTHGFQSSCPLSSRHVSQYDSMPKLSSITTSEETQSSSSSSSSN
EEKVDFKAYGNGYKTVFEEITAAECTASSGSIPSDLKGSYFRCGPAMFSAGSIAPPKTSI
IQPRDGAPIPDGQNPERMVQHPFEADGGVLGVTFQGNGTVTARFRYVRTIAFTNERRKGQ
RLYKAMDSTRELGYGIAEGIGNELHTPLYRHHLLPGLNKKRKNTSNTRVIYWGKRLLSMW
EGGAPYKLDGLALSTEGRSQLGGVIPEKDPFGSKMVIDPVKDRALMYKIVQGAKSSELTV
YEFNNKFRLVEEGDKDDEGKSTVDLPGLAMISDMAATANYALFVTPKVSTSMQFMFAKEP
GKVLSTEREPAMLHLVPRVGSNKDPLSLEIPFDGVVDANLQFINSYEDGNKIVLDAIRSD
GLKKLGSTKSSEWPFVSSREDYEEKASNRSLWRYEIDLSSGTVSKRKLSDIQCFFGGVKP
SQSTQKHDHIFMAIGGLGDDTAPPQGIAKFDCNSESIDSWMPEAYEFCGEPMFAPKVNPS
SEDDGYVLTVLFNGKSEQSELVVFESSDISPGPVCRIPLGIGVPHGLHGCFTDSEEAAWS
FEEIQRRAKLADKIESRGNRWNEVKSDFSGLGLRFDDMEEYFGDSFLS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatttctattatactgtttagctttcgcagttacccttaaatgtacacatgga
tttcaatcttcctgtccactaagttcacgtcatgtatcacaatatgattctatgccgaaa
ctttcatcgataactacatcagaagagacacaatcttcttcatcatcttcctcctcgaat
gaagaaaaagttgattttaaagcatacggaaatggatataagactgtatttgaggaaatt
accgctgctgaatgtacagcatcttctggatcgattccatctgatttgaaaggaagttac
tttcgatgtggtcctgcaatgtttagtgctggctctatagctccaccaaaaacttctatc
attcaaccaagagatggagcacctattcctgatggacaaaatcccgaacgaatggtccaa
catccctttgaggcggatggaggggtcttgggggttacatttcagggtaatgggacagta
acggctcgatttcgttatgttcgtactattgcatttactaatgaaaggcgtaaaggacaa
agactatataaagccatggattcgacacgggaacttggttatggtattgctgagggtatc
gggaacgaacttcatacacccttatatcgtcatcatttattacccgggttaaataagaaa
agaaagaatacttctaatactcgtgtaatatactgggggaagaggttattatcaatgtgg
gaaggaggagcgccttataaattagatggtttagcattatcgacagaaggtagatctcaa
cttgggggtgtaattccagaaaaagatcccttcggttctaagatggtaatagatccagtg
aaggatcgtgcactcatgtataaaattgtccagggtgcaaagtcttcggaattgactgta
tacgaatttaataacaagttccgcttagtcgaagaaggagataaggatgatgagggcaag
tcaacggtagacttaccaggactcgccatgatttctgatatggctgccactgcgaattat
gccctatttgtaacgccaaaagtttcgacaagtatgcagtttatgtttgccaaagaacct
gggaaagttttatccactgaaagagaacctgctatgcttcatttggtccctcgtgtcggc
agtaacaaagatccattaagtttagaaattccattcgatggtgtcgtcgatgcaaaccta
caatttatcaactcgtacgaggatggaaataaaattgtgcttgatgcgattcgttcagat
ggtcttaaaaagttgggctcaacgaagtcttcggaatggccgttcgtgtcctcgcgagaa
gattatgaagaaaaggcctctaataggtctctttggcggtatgaaattgatctaagtagt
ggtactgtctccaaaaggaaactgagtgatatacagtgcttttttggaggagtgaaacca
agccagtctacacaaaagcatgatcatatttttatggccatcggaggtttaggcgatgat
actgccccaccacaagggattgctaaattcgattgtaactcagagtctattgattcatgg
atgccagaagcatacgagttttgcggcgaacccatgtttgctccaaaagtgaatccatcg
tcggaagatgatgggtatgttttgactgttttgttcaatggtaaatcagagcaaagtgaa
cttgtcgtatttgaatcatccgatatttctccagggcctgtgtgtaggatccctcttggc
attggcgtcccccacggacttcatggttgcttcacagattcagaagaagccgcatggtct
tttgaagaaattcaacgcagagcaaagttagcggacaaaatagaaagtcgggggaatcgt
tggaatgaagtgaagagtgacttctcagggcttggacttcgatttgacgatatggaagaa
tactttggagattcttttctgtcatag
DBGET
integrated database retrieval system
