KEGG   Fragilariopsis cylindrus: FRACYDRAFT_211372
Entry
FRACYDRAFT_211372 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
fcy  Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_211372
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     FRACYDRAFT_211372
    REST complex
     FRACYDRAFT_211372
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    FRACYDRAFT_211372
SSDB
Motif
Pfam: PAH Sin3_corepress Sin3a_C PAH_ZNF598 At4g15545_C DUF3246
Other DBs
NCBI-ProteinID: OEU11537
JGI: 211372
UniProt: A0A1E7F083
LinkDB
Position
Unknown
AA seq 1129 aa
MRELRVEDALLYLDDVKREFGGKPRVYNEFLAIMKNFKSQEVDTPGVIARVSKLFRGNNH
LILGFNKFLPDGYKISMEDLRQMDQAYAREEEIQLPPSHMAGPLSQQLQQQHQPPIQDVQ
MKQAQANRQRMQVATDLQEQQRQQQAIPKPPKQPKQGGKAGKSRKVHDVIPPQQQQQPPQ
PPPQQQPQQIQQQNQPHQAVEFDHAISYVTTIKRRFANDQSTYHSFLEILHTYQKEQRGI
KEVLEQVAHLFQDHPDLLKEFTFFLPDAVQEQAKERLHRAAAESESRLSAQKDKKNKQLQ
GSSKEIVDMTEHPIPVDQTEARGQKRYHKDVQEAPVVITYPQTPETFVYNSAVERQFFDA
AKEALASYTRDGGQAWAEFMKCLDMYAQEILSRSEMLNFVEPLLGKRNNKLFEEFKRILA
AAGGQGTNTVPSMEDSWYSVPLSEIDFSRCRRCSPSYRALPRDYPAPPCSKRSDEERMVL
NDVWVSLPVGSEESYTFRHMRRNTYEETLFRVEDERFEIDMTIDSNLCTLALLEPFAQEM
AQLSGNDGQMQIDKENESKTNMEQKGLGGKRFRYTFDPTILGVIHRNSITRIYGDAGEEM
LELLKTNPSVAIPIVVDRLRQKDVEWQKVRDRLNRHWKEMAENNYYKSLDHRSLTWRTTD
KRAISNRTLLTDIKDRAANDGSESEAALQVRIDKAKEEHGLFFEVTMGNAFLQKIDLSVL
PKPDRRLFTPDMSLMYEDTAWVQKDAYRILSFALERGSISPTDKERCHRLWTEFLGPWFD
LNLNWMLTPAVNFQETKTSSPEEDEEEEDSLDEEGEINSRIVTETVRDDEHDCDDDCDSP
THMDHHPLPAGSTVTTIYGEGRIMSCRTDIYVVKLAFGTAYLRPSAVLCSVLAAEKSAYT
TQRMDDDNTKLDRPNDKLMIGTQSLYLFFRLHQILCRRIGIARKLAFEVKNDPSLQTLVE
QMPGQYGSGAAAGKRRYDAFLSLVYALLDGGTGGAAEGGKFEDRVRSLLGHGGYELATMD
KLISHILKNIQSMANDDTMWSLVQLFRRHLDAGGFKPEAFRQEAAYLSDGEHMYAFQLCP
IHKDRGDKSVLYVENLGVIVGSEEEDSLPSDPPIEETKTKEPISKRQKR
NT seq 3390 nt   +upstreamnt  +downstreamnt
atgagggagctccgtgtggaagatgccttgctctatcttgacgatgtgaagagagaattt
ggcggcaaacctcgtgtctacaatgaattcttggccatcatgaaaaatttcaagagtcaa
gaagttgatacacccggtgtcatcgcccgtgtatctaaattatttcgtggaaataatcac
ttgattttgggattcaacaagtttttacctgacggatacaaaattagtatggaagatttg
agacaaatggatcaggcctatgcacgggaggaggagatccaactaccaccctcgcatatg
gctggtcccttgtctcagcaacttcagcagcagcatcaaccaccgatccaggatgtgcag
atgaaacaagcacaagcaaatcgacaacggatgcaagttgccacggatttacaagagcaa
cagcgccaacaacaggctatcccaaagcctccgaaacaaccaaaacaagggggcaaagct
gggaagagccgcaaagtacatgatgttattccaccgcagcaacagcaacaaccgccgcaa
ccaccaccgcaacaacagcctcagcaaatacagcagcaaaatcagccgcatcaagctgtc
gaattcgaccatgctatttcgtatgtgactacgatcaaacgaaggtttgcgaatgatcaa
agtacttaccattcctttttggagattcttcacacctaccaaaaggaacaacgaggaatc
aaggaagtcttggaacaggttgcgcacttatttcaggatcatccagatcttttgaaggaa
ttcaccttcttccttcccgatgctgtccaggagcaagcaaaagaacgattgcaccgtgct
gcagctgaatctgaaagtcgtctatctgcacaaaaagataagaagaataagcaacttcag
ggttcctcaaaggagattgtcgacatgacggagcatccaatacctgtcgatcaaaccgag
gcacgtgggcaaaagagataccacaaggatgtacaggaagctccagtcgtaatcacctat
cctcagactccggagaccttcgtgtataattcggcagtagaacgtcaattctttgatgct
gccaaagaagcccttgcatcgtatactcgtgatggtggtcaggcatgggcagaatttatg
aagtgtctcgacatgtacgcacaggagattctttctaggagtgaaatgcttaattttgtt
gagccacttcttggtaaacgaaacaataaactctttgaagaattcaaacgtatcctggcc
gcggctggtggccaagggacgaatacggtcccttcgatggaagattcttggtactctgtt
cctttatcagagatcgattttagtaggtgtcgtcgatgcagcccatcataccgcgcctta
ccacgtgattatcctgcccctccatgcagcaaaagaagcgacgaagaaaggatggtttta
aacgacgtatgggtttctcttcctgttggaagtgaagagagttataccttccgtcacatg
agaaggaacacgtacgaggagactcttttccgtgtcgaagatgaacgatttgagatcgac
atgacaatcgatagcaatctttgcactctggcactcttggagccatttgcacaggaaatg
gcacaactctcggggaatgatggtcagatgcagatcgacaaagaaaacgaatcgaaaacc
aatatggaacaaaagggactcggcgggaaacgttttcggtatacgttcgatccaactatt
ttgggtgtcatccatcgaaattctatcactcgtatatacggtgatgctggtgaagagatg
ctagagttgttgaaaactaatccttctgtggctattcctattgtagttgatcgtctcagg
caaaaggatgttgaatggcagaaggtcagagaccgactcaatcgtcactggaaggaaatg
gcagaaaacaactattataagagtctcgatcatcgaagtcttacatggagaaccacagac
aagcgagcgatcagtaatcgaacgcttcttaccgatattaaggatagagcggctaacgac
gggagtgaaagtgaagcagcgcttcaggttcgtattgacaaggctaaagaagagcacgga
ttattctttgaagttactatgggcaatgcgttccttcaaaaaattgatctttccgtacta
ccgaaaccagatcggagactttttacaccggacatgagtctcatgtacgaggatactgct
tgggttcaaaaggatgcatacagaatactttcttttgcattggagaggggttccatatcc
ccgaccgacaaggagaggtgccaccgtctttggactgagttccttggaccttggttcgac
ttaaacctaaactggatgttgacgccagcagttaatttccaagaaacaaagacgtcgtcc
ccagaggaggatgaagaagaagaagatagtctcgacgaagaaggtgaaatcaattccaga
attgtgacggaaactgtccgtgatgatgaacatgattgtgatgatgattgcgactcacct
actcatatggatcatcatccgcttcctgcgggttcaactgttactacaatttacggagaa
ggtcgtattatgagctgccgcaccgatatatacgttgtgaaattggcgtttgggaccgcc
tatctgcgacctagtgccgttctttgttctgttcttgcagccgaaaaatctgcgtatacc
acacagcgaatggatgatgacaatacgaaattggatcgtccgaacgacaaacttatgatt
ggtacccaaagtctttacttgttctttcggctccatcaaattctttgtcgtcgtattggc
atagcaaggaaacttgcttttgaagtaaaaaatgacccgtcgttgcaaacattagtcgag
caaatgcccggtcaatacggtagcggtgccgctgcgggtaaaagacgatacgatgcattt
ttgtcgttggtatacgcactactcgatggtggaactggcggggctgcagaggggggtaaa
tttgaagatcgtgttcgatcattgttgggacacgggggttacgaacttgctactatggac
aagttgatttctcatattttgaagaatatccaatctatggcaaatgatgataccatgtgg
agtctggtgcagctcttccgtcgtcatctcgatgcaggtggattcaagcccgaggcattc
cgtcaggaagcagcatacctatcagatggggaacacatgtatgccttccagctctgcccg
atccacaaagatagaggggacaaatctgtcttgtacgtggagaatttgggtgtcattgtt
ggatcggaagaggaagattcattaccatcggatcctccgatcgaagaaacaaaaacaaaa
gaaccaatttcaaagagacagaaacgatga

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