Fragilariopsis cylindrus: FRACYDRAFT_211372
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Entry
FRACYDRAFT_211372 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K11644
paired amphipathic helix protein Sin3a
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_211372
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
FRACYDRAFT_211372
REST complex
FRACYDRAFT_211372
Heterochromatin formation proteins
Other heterochromatin formation proteins
FRACYDRAFT_211372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3_corepress
Sin3a_C
PAH_ZNF598
At4g15545_C
DUF3246
Motif
Other DBs
NCBI-ProteinID:
OEU11537
JGI:
211372
UniProt:
A0A1E7F083
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MRELRVEDALLYLDDVKREFGGKPRVYNEFLAIMKNFKSQEVDTPGVIARVSKLFRGNNH
LILGFNKFLPDGYKISMEDLRQMDQAYAREEEIQLPPSHMAGPLSQQLQQQHQPPIQDVQ
MKQAQANRQRMQVATDLQEQQRQQQAIPKPPKQPKQGGKAGKSRKVHDVIPPQQQQQPPQ
PPPQQQPQQIQQQNQPHQAVEFDHAISYVTTIKRRFANDQSTYHSFLEILHTYQKEQRGI
KEVLEQVAHLFQDHPDLLKEFTFFLPDAVQEQAKERLHRAAAESESRLSAQKDKKNKQLQ
GSSKEIVDMTEHPIPVDQTEARGQKRYHKDVQEAPVVITYPQTPETFVYNSAVERQFFDA
AKEALASYTRDGGQAWAEFMKCLDMYAQEILSRSEMLNFVEPLLGKRNNKLFEEFKRILA
AAGGQGTNTVPSMEDSWYSVPLSEIDFSRCRRCSPSYRALPRDYPAPPCSKRSDEERMVL
NDVWVSLPVGSEESYTFRHMRRNTYEETLFRVEDERFEIDMTIDSNLCTLALLEPFAQEM
AQLSGNDGQMQIDKENESKTNMEQKGLGGKRFRYTFDPTILGVIHRNSITRIYGDAGEEM
LELLKTNPSVAIPIVVDRLRQKDVEWQKVRDRLNRHWKEMAENNYYKSLDHRSLTWRTTD
KRAISNRTLLTDIKDRAANDGSESEAALQVRIDKAKEEHGLFFEVTMGNAFLQKIDLSVL
PKPDRRLFTPDMSLMYEDTAWVQKDAYRILSFALERGSISPTDKERCHRLWTEFLGPWFD
LNLNWMLTPAVNFQETKTSSPEEDEEEEDSLDEEGEINSRIVTETVRDDEHDCDDDCDSP
THMDHHPLPAGSTVTTIYGEGRIMSCRTDIYVVKLAFGTAYLRPSAVLCSVLAAEKSAYT
TQRMDDDNTKLDRPNDKLMIGTQSLYLFFRLHQILCRRIGIARKLAFEVKNDPSLQTLVE
QMPGQYGSGAAAGKRRYDAFLSLVYALLDGGTGGAAEGGKFEDRVRSLLGHGGYELATMD
KLISHILKNIQSMANDDTMWSLVQLFRRHLDAGGFKPEAFRQEAAYLSDGEHMYAFQLCP
IHKDRGDKSVLYVENLGVIVGSEEEDSLPSDPPIEETKTKEPISKRQKR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgagggagctccgtgtggaagatgccttgctctatcttgacgatgtgaagagagaattt
ggcggcaaacctcgtgtctacaatgaattcttggccatcatgaaaaatttcaagagtcaa
gaagttgatacacccggtgtcatcgcccgtgtatctaaattatttcgtggaaataatcac
ttgattttgggattcaacaagtttttacctgacggatacaaaattagtatggaagatttg
agacaaatggatcaggcctatgcacgggaggaggagatccaactaccaccctcgcatatg
gctggtcccttgtctcagcaacttcagcagcagcatcaaccaccgatccaggatgtgcag
atgaaacaagcacaagcaaatcgacaacggatgcaagttgccacggatttacaagagcaa
cagcgccaacaacaggctatcccaaagcctccgaaacaaccaaaacaagggggcaaagct
gggaagagccgcaaagtacatgatgttattccaccgcagcaacagcaacaaccgccgcaa
ccaccaccgcaacaacagcctcagcaaatacagcagcaaaatcagccgcatcaagctgtc
gaattcgaccatgctatttcgtatgtgactacgatcaaacgaaggtttgcgaatgatcaa
agtacttaccattcctttttggagattcttcacacctaccaaaaggaacaacgaggaatc
aaggaagtcttggaacaggttgcgcacttatttcaggatcatccagatcttttgaaggaa
ttcaccttcttccttcccgatgctgtccaggagcaagcaaaagaacgattgcaccgtgct
gcagctgaatctgaaagtcgtctatctgcacaaaaagataagaagaataagcaacttcag
ggttcctcaaaggagattgtcgacatgacggagcatccaatacctgtcgatcaaaccgag
gcacgtgggcaaaagagataccacaaggatgtacaggaagctccagtcgtaatcacctat
cctcagactccggagaccttcgtgtataattcggcagtagaacgtcaattctttgatgct
gccaaagaagcccttgcatcgtatactcgtgatggtggtcaggcatgggcagaatttatg
aagtgtctcgacatgtacgcacaggagattctttctaggagtgaaatgcttaattttgtt
gagccacttcttggtaaacgaaacaataaactctttgaagaattcaaacgtatcctggcc
gcggctggtggccaagggacgaatacggtcccttcgatggaagattcttggtactctgtt
cctttatcagagatcgattttagtaggtgtcgtcgatgcagcccatcataccgcgcctta
ccacgtgattatcctgcccctccatgcagcaaaagaagcgacgaagaaaggatggtttta
aacgacgtatgggtttctcttcctgttggaagtgaagagagttataccttccgtcacatg
agaaggaacacgtacgaggagactcttttccgtgtcgaagatgaacgatttgagatcgac
atgacaatcgatagcaatctttgcactctggcactcttggagccatttgcacaggaaatg
gcacaactctcggggaatgatggtcagatgcagatcgacaaagaaaacgaatcgaaaacc
aatatggaacaaaagggactcggcgggaaacgttttcggtatacgttcgatccaactatt
ttgggtgtcatccatcgaaattctatcactcgtatatacggtgatgctggtgaagagatg
ctagagttgttgaaaactaatccttctgtggctattcctattgtagttgatcgtctcagg
caaaaggatgttgaatggcagaaggtcagagaccgactcaatcgtcactggaaggaaatg
gcagaaaacaactattataagagtctcgatcatcgaagtcttacatggagaaccacagac
aagcgagcgatcagtaatcgaacgcttcttaccgatattaaggatagagcggctaacgac
gggagtgaaagtgaagcagcgcttcaggttcgtattgacaaggctaaagaagagcacgga
ttattctttgaagttactatgggcaatgcgttccttcaaaaaattgatctttccgtacta
ccgaaaccagatcggagactttttacaccggacatgagtctcatgtacgaggatactgct
tgggttcaaaaggatgcatacagaatactttcttttgcattggagaggggttccatatcc
ccgaccgacaaggagaggtgccaccgtctttggactgagttccttggaccttggttcgac
ttaaacctaaactggatgttgacgccagcagttaatttccaagaaacaaagacgtcgtcc
ccagaggaggatgaagaagaagaagatagtctcgacgaagaaggtgaaatcaattccaga
attgtgacggaaactgtccgtgatgatgaacatgattgtgatgatgattgcgactcacct
actcatatggatcatcatccgcttcctgcgggttcaactgttactacaatttacggagaa
ggtcgtattatgagctgccgcaccgatatatacgttgtgaaattggcgtttgggaccgcc
tatctgcgacctagtgccgttctttgttctgttcttgcagccgaaaaatctgcgtatacc
acacagcgaatggatgatgacaatacgaaattggatcgtccgaacgacaaacttatgatt
ggtacccaaagtctttacttgttctttcggctccatcaaattctttgtcgtcgtattggc
atagcaaggaaacttgcttttgaagtaaaaaatgacccgtcgttgcaaacattagtcgag
caaatgcccggtcaatacggtagcggtgccgctgcgggtaaaagacgatacgatgcattt
ttgtcgttggtatacgcactactcgatggtggaactggcggggctgcagaggggggtaaa
tttgaagatcgtgttcgatcattgttgggacacgggggttacgaacttgctactatggac
aagttgatttctcatattttgaagaatatccaatctatggcaaatgatgataccatgtgg
agtctggtgcagctcttccgtcgtcatctcgatgcaggtggattcaagcccgaggcattc
cgtcaggaagcagcatacctatcagatggggaacacatgtatgccttccagctctgcccg
atccacaaagatagaggggacaaatctgtcttgtacgtggagaatttgggtgtcattgtt
ggatcggaagaggaagattcattaccatcggatcctccgatcgaagaaacaaaaacaaaa
gaaccaatttcaaagagacagaaacgatga
DBGET
integrated database retrieval system