Fragilariopsis cylindrus: FRACYDRAFT_212068
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Entry
FRACYDRAFT_212068 CDS
T04784
Name
(GenBank) Skp1-like protein
KO
K03094
S-phase kinase-associated protein 1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03083
Polycomb repressive complex
fcy04120
Ubiquitin mediated proteolysis
fcy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FRACYDRAFT_212068
04120 Ubiquitin mediated proteolysis
FRACYDRAFT_212068
09126 Chromosome
03083 Polycomb repressive complex
FRACYDRAFT_212068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_212068
04121 Ubiquitin system [BR:
fcy04121
]
FRACYDRAFT_212068
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_212068
Membrane trafficking [BR:
fcy04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
FRACYDRAFT_212068
Ubiquitin system [BR:
fcy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
FRACYDRAFT_212068
Cul7 complex
FRACYDRAFT_212068
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
FRACYDRAFT_212068
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
FRACYDRAFT_212068
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
DUF3246
Cwf_Cwc_15
WHD_MCM7
Nro1
Motif
Other DBs
NCBI-ProteinID:
OEU09899
JGI:
212068
UniProt:
A0A1E7EVM1
LinkDB
All DBs
Position
Unknown
AA seq
193 aa
AA seq
DB search
MDVEDSKETAASTADTSSSGVTIQLISKEGDKFPVPITVSNMSELVKSMMDDKDDDDDDD
DDEDDDGKEKITEIPLPNVKSEVLKKVIEFCEHHLAEPMTEIEKPLKSQNMADVVQKWYA
DFVDLEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPDEIRATFNITNDFSPEEE
AQVREENKWCEEA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgaagatagcaaagaaacagcagcctctactgctgatactagtagtagtggt
gtcactattcaattgatctcgaaggaaggtgacaagttccccgttcctattacggtatcg
aatatgtccgaacttgtcaagtccatgatggatgacaaagatgatgatgatgatgacgac
gatgatgaggatgacgatggaaaggagaagattactgaaattccattaccaaatgtcaaa
tccgaagtcttgaaaaaggtcattgaattttgtgaacatcatttagcggaaccgatgacc
gaaattgaaaaaccattaaagtcacaaaatatggctgatgtcgtccaaaaatggtatgcc
gactttgttgatttagaacaagtcttattatttgaattgatattggcggcgaattatatg
gatattaaacccttgttggatttaacctgtgcgacggtcgcatcgatgattaaaggtaaa
acacccgatgaaattcgtgctacctttaatattactaatgatttttcaccagaagaagaa
gcacaagtacgtgaagaaaataaatggtgtgaagaagcataa
DBGET
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