KEGG   Fragilariopsis cylindrus: FRACYDRAFT_212068
Entry
FRACYDRAFT_212068 CDS       T04784                                 
Name
(GenBank) Skp1-like protein
  KO
K03094  S-phase kinase-associated protein 1
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03083  Polycomb repressive complex
fcy04120  Ubiquitin mediated proteolysis
fcy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    FRACYDRAFT_212068
   04120 Ubiquitin mediated proteolysis
    FRACYDRAFT_212068
  09126 Chromosome
   03083 Polycomb repressive complex
    FRACYDRAFT_212068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fcy04131]
    FRACYDRAFT_212068
   04121 Ubiquitin system [BR:fcy04121]
    FRACYDRAFT_212068
   03036 Chromosome and associated proteins [BR:fcy03036]
    FRACYDRAFT_212068
Membrane trafficking [BR:fcy04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    FRACYDRAFT_212068
Ubiquitin system [BR:fcy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     FRACYDRAFT_212068
   Cul7 complex
     FRACYDRAFT_212068
Chromosome and associated proteins [BR:fcy03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     FRACYDRAFT_212068
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     FRACYDRAFT_212068
SSDB
Motif
Pfam: Skp1 Skp1_POZ DUF3246 Cwf_Cwc_15 WHD_MCM7 Nro1
Other DBs
NCBI-ProteinID: OEU09899
JGI: 212068
UniProt: A0A1E7EVM1
LinkDB
Position
Unknown
AA seq 193 aa
MDVEDSKETAASTADTSSSGVTIQLISKEGDKFPVPITVSNMSELVKSMMDDKDDDDDDD
DDEDDDGKEKITEIPLPNVKSEVLKKVIEFCEHHLAEPMTEIEKPLKSQNMADVVQKWYA
DFVDLEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPDEIRATFNITNDFSPEEE
AQVREENKWCEEA
NT seq 582 nt   +upstreamnt  +downstreamnt
atggatgtcgaagatagcaaagaaacagcagcctctactgctgatactagtagtagtggt
gtcactattcaattgatctcgaaggaaggtgacaagttccccgttcctattacggtatcg
aatatgtccgaacttgtcaagtccatgatggatgacaaagatgatgatgatgatgacgac
gatgatgaggatgacgatggaaaggagaagattactgaaattccattaccaaatgtcaaa
tccgaagtcttgaaaaaggtcattgaattttgtgaacatcatttagcggaaccgatgacc
gaaattgaaaaaccattaaagtcacaaaatatggctgatgtcgtccaaaaatggtatgcc
gactttgttgatttagaacaagtcttattatttgaattgatattggcggcgaattatatg
gatattaaacccttgttggatttaacctgtgcgacggtcgcatcgatgattaaaggtaaa
acacccgatgaaattcgtgctacctttaatattactaatgatttttcaccagaagaagaa
gcacaagtacgtgaagaaaataaatggtgtgaagaagcataa

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