Fragilariopsis cylindrus: FRACYDRAFT_212147
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Entry
FRACYDRAFT_212147 CDS
T04784
Name
(GenBank) ras-related small GTPase Rab5
KO
K07889
Ras-related protein Rab-5C
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04144
Endocytosis
fcy04145
Phagosome
fcy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
FRACYDRAFT_212147
04145 Phagosome
FRACYDRAFT_212147
04148 Efferocytosis
FRACYDRAFT_212147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_212147
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_212147
04031 GTP-binding proteins [BR:
fcy04031
]
FRACYDRAFT_212147
Membrane trafficking [BR:
fcy04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
FRACYDRAFT_212147
Endosome - Lysosome transport
FRACYDRAFT_212147
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRACYDRAFT_212147
Exosomal proteins of other body fluids (saliva and urine)
FRACYDRAFT_212147
Exosomal proteins of colorectal cancer cells
FRACYDRAFT_212147
Exosomal proteins of bladder cancer cells
FRACYDRAFT_212147
GTP-binding proteins [BR:
fcy04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
FRACYDRAFT_212147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
GTP_EFTU
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
OEU09425
JGI:
212147
UniProt:
A0A1E7EUF1
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSSSRVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDESTVKFE
IWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAG
NKADLESRRKVEFEEAQSYAEENGILHLETSAKNANNVKALFVELAKKLPKNAPQPEREA
FPLAAPQNDNRNCC
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaagcagagttcatcatttcaaactagtacttctcggagatacagctgttgga
aaatcatgtctcgttgttcgtttcgttcgtgatgaattttttgaatttcaagaaccaaca
atcggagccgccttcctaactcaaaccgttcagttggatgagtcaactgtgaagttcgaa
atttgggatacagctggacaagaacgataccgttctttagctcctatgtattaccgaggt
gctgctgcggctattattgtttatgatattactaatcctgattcatttactggtgctaaa
tcatgggtgaaagaacttcaacgtcgaggtgatcccaatgttgttattgccctagctggg
aacaaggcagatctagagtctagacgtaaggtagaatttgaagaagcacaatcctatgcg
gaagagaatggtattctacatttagaaacatccgcgaagaacgctaataatgttaaggcc
ttgtttgtagaacttgcaaagaaattaccgaagaatgcaccacaacctgaacgggaggca
ttcccgttagcggctcctcaaaatgataatcgcaactgttgctaa
DBGET
integrated database retrieval system