KEGG   Fragilariopsis cylindrus: FRACYDRAFT_212147
Entry
FRACYDRAFT_212147 CDS       T04784                                 
Name
(GenBank) ras-related small GTPase Rab5
  KO
K07889  Ras-related protein Rab-5C
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy04144  Endocytosis
fcy04145  Phagosome
fcy04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    FRACYDRAFT_212147
   04145 Phagosome
    FRACYDRAFT_212147
   04148 Efferocytosis
    FRACYDRAFT_212147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fcy04131]
    FRACYDRAFT_212147
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fcy04147]
    FRACYDRAFT_212147
   04031 GTP-binding proteins [BR:fcy04031]
    FRACYDRAFT_212147
Membrane trafficking [BR:fcy04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    FRACYDRAFT_212147
 Endosome - Lysosome transport
    FRACYDRAFT_212147
Exosome [BR:fcy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   FRACYDRAFT_212147
  Exosomal proteins of other body fluids (saliva and urine)
   FRACYDRAFT_212147
  Exosomal proteins of colorectal cancer cells
   FRACYDRAFT_212147
  Exosomal proteins of bladder cancer cells
   FRACYDRAFT_212147
GTP-binding proteins [BR:fcy04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    FRACYDRAFT_212147
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase GTP_EFTU Gtr1_RagA
Other DBs
NCBI-ProteinID: OEU09425
JGI: 212147
UniProt: A0A1E7EUF1
LinkDB
Position
Unknown
AA seq 194 aa
MSSSRVHHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGAAFLTQTVQLDESTVKFE
IWDTAGQERYRSLAPMYYRGAAAAIIVYDITNPDSFTGAKSWVKELQRRGDPNVVIALAG
NKADLESRRKVEFEEAQSYAEENGILHLETSAKNANNVKALFVELAKKLPKNAPQPEREA
FPLAAPQNDNRNCC
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcatcaagcagagttcatcatttcaaactagtacttctcggagatacagctgttgga
aaatcatgtctcgttgttcgtttcgttcgtgatgaattttttgaatttcaagaaccaaca
atcggagccgccttcctaactcaaaccgttcagttggatgagtcaactgtgaagttcgaa
atttgggatacagctggacaagaacgataccgttctttagctcctatgtattaccgaggt
gctgctgcggctattattgtttatgatattactaatcctgattcatttactggtgctaaa
tcatgggtgaaagaacttcaacgtcgaggtgatcccaatgttgttattgccctagctggg
aacaaggcagatctagagtctagacgtaaggtagaatttgaagaagcacaatcctatgcg
gaagagaatggtattctacatttagaaacatccgcgaagaacgctaataatgttaaggcc
ttgtttgtagaacttgcaaagaaattaccgaagaatgcaccacaacctgaacgggaggca
ttcccgttagcggctcctcaaaatgataatcgcaactgttgctaa

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