Fragilariopsis cylindrus: FRACYDRAFT_212991
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Entry
FRACYDRAFT_212991 CDS
T04784
Name
(GenBank) RecF/RecN/SMC protein
Organism
fcy
Fragilariopsis cylindrus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
DUF3450
Motif
Other DBs
NCBI-ProteinID:
OEU07887
JGI:
212991
UniProt:
A0A1E7EQ09
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
MNDDNGDGAEEPPPRLLITKMVLENFKSYAGVKEIGPFHKCFSAVVGPNGSGKSNVIDAM
LFVFGKRAKKLRLNKVSELIHKSDGVKDNPPQYARVSVHFQDIVDTGSGDEDYRIIPNTE
TIVTRIANKNNSSTYKLNGKNSSFKDIGIYLSSKGIDLDNNRFLILQGEVEMISMMPPKG
KNEGDEGLLEYLEDIIGSSKFVEATNEAAEKVDSLSEVRQEKLNRVKAVEREKDNLEGAK
QEAEALLGKERDIRRKQNILYQIHAMRADKESDKYTQQNETLTEKLEVERERVAETRKRI
KEIESGLAEQRKDYDASYKELKQTKEEFSAYERRDIKLRETIKHEKANKKKLEDKIKAEE
KKETKADEKMTSAEERIPQLEEEIQELTESKEEEDAKLEEIEEETKVVTQTIRRQLEAKT
TELAPVKQERAVLQAALDTADTELKLMEDSSTRIKERLASAESELETLDDTQGSKREILK
DQEKELVSTKQQIVSLEEEDRDLSTKEESLGKQHKQLLTQVEDAKSALRSTGGGKSRSKA
VQGILNASKKGGELSKVGVLGRLGDLATINDQYDVAVSTACGMLDNIVVQTTAGAQRCLE
FLRKYNLGRASFIPLDKQKKGAHDRVVETPENAPRLFDLISSANYAVTPALYLAVGNTLV
APDLETASHWAYDFSRRWRVVTLDGKLIETAGTMAGGGKNVRRGGMRLGNSRQPAISVSA
GVDEEELIEKLSKQTDDLRATIQDSRNRRRSIKEELRKLTTSVKSLKTSMPRLSLEIDGC
DTTREELTKLIPELRAQSEVSADDLQKVKVLEAKVEQCKSDMISCVELASKLEKMVSKLQ
KDILDAGGPRLKKQKGKCGKILSQLNETEKAFSSAKVEIVSSKKALAKAKKAKDTLDKQL
INCGSILTEKTTEFNSLESEALVVIQAYEEVKEIEEKKRIALEGATKEAEELKQSQSEIQ
FIEIDLLGQLDALKKQISECRKKKTHWENEISTLRETEDEYEIDDEDDEEEEEEDDNSRR
DSSSQPENTEMTDAQEGSSSNNDDNDEMSSASATKVKSSSTPLFSQAALEKYDIEDLKGT
IGMLQNERSNLAKNANMGAIAEYRKKEADYLSRVSELDGVTEERNGARKEHEELRRQRLE
MFMEGFGEITLKLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNISNLSG
GEKTLSSLSLVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRN
NMFELADRLVGIYKTNDASKSIAINPKSFKKRAPLPLQNSTNSTVTASNLLLNEKNRNQV
NHSQEESIITQN
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgacaacggtgacggggcagaagaacccccaccgagactactgattacaaaa
atggtattggaaaacttcaaatcatacgctggtgtgaaggaaattggtccatttcacaaa
tgtttttctgctgtggtaggaccgaacggttcaggaaaatcaaatgtgattgatgctatg
cttttcgtatttggtaaacgtgccaagaaacttcgtttaaacaaggtctccgaactcatt
cataagagtgatggtgtcaaagacaatccaccacaatatgcacgagtttctgttcacttt
caagatatcgtcgatacaggtagtggcgacgaggattatcgtatcatacctaataccgaa
acgattgttacacggattgcaaacaagaataactcatcaacgtacaagttgaatggtaaa
aattcatccttcaaggatattggtatctatctatcatcgaagggtatcgatctagacaat
aatcgatttcttattttgcaaggtgaagttgaaatgattagtatgatgcctcccaagggt
aaaaatgaaggcgacgaaggactgttggaatatcttgaagatatcattggttcatcaaaa
tttgttgaagcgaccaatgaagcagctgaaaaggtcgacagtctctcggaggttcgacaa
gaaaaattgaacagagttaaggcagttgaaagggaaaaagacaatcttgaaggggccaaa
caggaagcggaagcattactggggaaggaacgagacatacgacgcaaacaaaatattctc
tatcagatccatgctatgagagctgacaaagagtccgataagtatacacaacaaaatgaa
acacttacagagaaactcgaagtggaacgtgaaagagtagccgaaactcgtaaacggatc
aaagaaatcgaaagtggcttggcagagcaacgtaaggactacgacgcttcgtacaaggaa
ttgaaacaaacaaaggaagaatttagtgcatacgaacggagggatatcaagttgagagaa
actatcaagcacgagaaggcgaacaaaaagaaactagaagacaaaatcaaggcagaagaa
aagaaagagacaaaggccgacgagaaaatgacttcggcggaagaacgaattccgcaatta
gaggaagaaatccaagaacttaccgagtccaaggaggaagaagatgctaaattggaagaa
attgaagaagaaacaaaagttgttactcaaacaattcgtcgtcagcttgaagcgaagaca
accgaacttgctccagtaaagcaagaacgagctgtattgcaagctgcattggatacagca
gatacagaactaaagctgatggaagattcatcaactagaatcaaggagagacttgcttcg
gcagaatcagaacttgaaactcttgatgatacccaaggaagcaaacgtgagattttgaaa
gatcaagagaaagaactcgtttcgactaagcaacaaattgtcagtttagaagaagaagat
cgtgacctatcaacaaaagaagagtctttaggaaaacaacacaagcaactattgactcaa
gtcgaggatgccaagtcagctttacgatccactggtggaggaaaatcacgttctaaggct
gtacagggaattctcaacgcatcgaaaaagggcggtgagctctcaaaggtgggagtacta
ggtcgtctcggtgatttggccacaatcaacgatcaatatgatgttgctgtctcaacggca
tgtggtatgttggataatattgttgtccaaacaactgccggtgcccaacgatgccttgaa
tttcttcgaaagtacaatcttggacgtgctagttttattcctctagataaacagaaaaag
ggagcacatgatcgtgtggtggagacccctgaaaatgcacctcgtttgtttgacctcatc
tcatcagccaattatgccgtcactccagccttatatctcgctgttggaaacaccctagtt
gctcctgatctagaaactgcgtctcattgggcctatgacttctctagacgttggcgtgtt
gtcactttagacggtaaattgattgaaaccgcaggaaccatggcgggtggaggaaaaaat
gttcgtcgcggaggaatgcgtctcggaaactctcgccaacctgccatatcagtttcagca
ggagtagacgaagaagagcttattgaaaagcttagtaaacaaactgatgacttgcgtgca
acgattcaagattctcgtaatagacgacgatctatcaaggaagaactgcgaaaattgacg
acgagtgtaaaatctttgaaaactagcatgccaagattatcgcttgaaatcgacggatgt
gatactactcgagaggaattaacgaaactgatcccagaactacgtgctcaaagcgaagtg
agcgcggacgatctacaaaaggtgaaagttcttgaggccaaggtagaacagtgtaaatca
gacatgatatcttgtgtcgaacttgcaagtaagctcgaaaaaatggtatctaaactgcag
aaagatatcttagatgccggcggtccaaggttgaagaagcaaaaggggaaatgcggaaag
attctttcacaattgaatgaaacggagaaagctttcagttctgcgaaagttgaaattgtt
tcatcgaaaaaggctttagcaaaggccaaaaaagcgaaggacactttggataaacagctt
attaattgtggttctattctcacagaaaagaccacagaatttaatagtctagaatccgag
gcgttggtcgtaatccaagcttacgaggaagtgaaagagatcgaggaaaagaaacgaatc
gctttggaaggtgcaacgaaagaagctgaggaattaaagcagtctcaatctgaaattcaa
ttcatcgagatcgacttattgggacaacttgatgctctgaaaaaacaaatatcagaatgt
cgtaagaagaaaacacattgggagaatgaaatttccactttgcgtgaaaccgaagacgag
tatgagatagatgacgaagatgacgaggaggaagaagaagaagatgataacagtcgaagg
gatagcagtagccaaccagagaatactgaaatgactgatgcacaagaaggctcttcctcc
aacaatgacgacaatgacgagatgtcgagtgcgagtgcgactaaagtcaaatcatcttcc
actccattattttctcaagcggcgcttgagaagtacgacattgaagatctgaagggaact
ataggcatgctacagaatgaaagaagtaatcttgccaagaatgcgaatatgggagcaatt
gctgaataccgaaagaaggaggcagactatctatcaagggtttctgagttggacggagtc
acggaggagcgtaacggtgctcgaaaagaacacgaagaactccgtcgccagcgtctcgag
atgtttatggagggattcggggagattacgttgaagctcaaggagatgtaccagatgatt
acacttggcggagatgctgagttagaattggtcgactcgttagatccattttccgagggc
atcgtattttctgttcgacctccgaaaaagtcatggaaaaatattagcaatttatccgga
ggagagaagaccctttcttcgttatcactcgtatttgcacttcatcacttcaagccaaca
cccttgtacgtcatggatgaaatcgatgctgccttggatttcaagaatgtttccattgtt
gcaaactatatcaaggaacgtacgaagaatgcacagtttatcattatttcacttcgcaat
aacatgttcgaactagcagaccgtttggttgggatatacaagacaaatgatgcaagtaaa
agtattgcaattaatcccaaatcctttaagaaaagagcgccgcttcctcttcaaaactct
acaaacagtaccgtcaccgcttctaatcttttgctaaatgaaaagaatagaaatcaagtg
aatcactcacaagaagaatcgataatcactcaaaattga
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