Fragilariopsis cylindrus: FRACYDRAFT_213025
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Entry
FRACYDRAFT_213025 CDS
T04784
Name
(GenBank) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
FRACYDRAFT_213025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_213025
Membrane trafficking [BR:
fcy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
FRACYDRAFT_213025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-ProteinID:
OEU07691
JGI:
213025
UniProt:
A0A1E7EP30
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MASPIGQQQQQQQQQQQPQFQQQQQQQQQPVGQQQQPPTTNNINNNSISYTMKELYDCVQ
YCPNVLSRLYLQICAASALIRSGEESVRYVFKDLIEAVKCVQNPVRGLFLRHYLLQAFRD
KLPNIPIPIDQIGLPIRDGANQAQASHAGDDHRGEGTVKDSYEFVLSNFIEMNKLWVRIQ
HLPGDQRTKEVRRRREKDRNELRILVGTNLVRLSALDSITSTIYGQVILPTVLDQIVICA
DPLSQAYLIDCIVQVFPDEYHIETMPILLGVCPKLRDKVNIRTILISLMDRLVNYLADEE
LLDEKDSNQVKKSVALDSFNMFNECVQNVYNSRGPKLNAKEVIRLQTALLDFSMKCYKGN
LEQITLCLRNCQQQQQQQHQALEPVATKELEKLLSIPLDELGLGALNLDYYSDLIVFLPW
NNRREVALTMLKAVTNTTTSKKSAPDSVKGIEDLFSVIAPQQHHQFHNGAVAGGSIDRIQ
YQQDSALVSKFIGMLDNSDTDILFGMLDVARIHLSTGRNHASTAHVALVFASLKVARQEA
PEEDKKPAAKEEIVSPKVEKSKKTPKTVSCRKVFVFIQQIIASFAQTNPERGIKLYLEAA
LTADKLGFSLPEGNDQLETFGSITFELFTQSFSLYEQHVMADTRIQRRCVTSMIGKLLAC
RSLGKKEYEGLIMKTSKFAAKMIKKSEQCEMVTRCAHLFYNVVIGGDDDNNVVYANPQRC
LECLQRSLKLADSCTNVDPSNLRLFVDLLDSYCYFFEKKNSSITGNYITGLVALIKEQVN
SAGGDGSAMCPPAVGEAKAQFLQIVRHIKDMKKKNDDTSEQFKDIDVSAIET
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcccatcggtcaacaacagcaacagcaacagcaacagcaacagccacagttt
cagcagcagcagcaacagcagcagcaaccagttggacagcaacagcaacctcccaccacc
aataatatcaataataattcaatttcatatacaatgaaagaattatatgattgtgtacaa
tattgtcctaatgtattatcaagattgtatctacaaatttgtgctgcatctgcattaatt
cgatcaggggaagaaagtgtacgatatgtatttaaagatttaattgaagcagtaaaatgt
gtccagaatcctgttcggggattgtttttgcgtcattatctattacaagcatttcgtgat
aagttaccaaacataccaataccaattgatcaaattggactaccgatccgtgatggtgct
aatcaagcacaagcatcacatgcaggtgacgatcatcgtggtgaaggtactgttaaagat
tcatatgaatttgtactatctaactttattgaaatgaataaattatgggtacggatacaa
catttacctggtgatcaaagaacaaaagaagttcgacgtcgtcgtgaaaaggatcgtaat
gaattacgtatattagttggtactaatcttgttcgattaagtgcattggattcaattaca
tcaacaatttatggtcaagttatattaccaactgttttagatcaaattgttatctgtgct
gatccattaagtcaagcatatttaattgattgtatcgtacaggtattcccagatgagtat
catattgaaacaatgcctattctattaggagtttgtccaaaattacgtgataaagtcaat
atccgtacgatccttattagtttaatggatcgacttgttaattatctagcagatgaagaa
ttattagatgaaaaggactctaatcaagttaagaaaagtgttgcattggattcattcaac
atgtttaatgaatgtgtacagaatgtatacaattcacgtggaccgaaattaaatgcaaag
gaggttatacgactccaaactgcattgttggattttagtatgaaatgctacaagggtaat
ttagaacaaattacattatgtttacgaaattgtcagcaacaacaacaacaacaacaccag
gcattagaaccagttgctacaaaggaactagaaaaattactaagcattccattagatgaa
ttaggattaggtgcattaaatttagactattattctgatttaattgtatttttaccatgg
aataatcgtcgtgaggtcgcattaacgatgttgaaggctgttactaatacaacaacaagt
aaaaaatcagcacctgatagtgtgaagggaattgaagacttgttttctgttattgcaccc
cagcaacatcatcaatttcataatggagctgttgctggcgggagtattgatcgtattcag
tatcaacaagatagtgcactcgtatcgaaatttattggtatgttagataattctgatacc
gatattctttttggaatgttggatgttgcacgtatccatttgagtaccggtcgtaatcat
gcaagtaccgctcatgtggcattagtatttgcatcattaaaagtagcacgacaagaagca
ccagaagaagataagaaacctgcagctaaagaagaaatcgtgtcacccaaagtggaaaaa
tcgaagaagacgcccaagactgtgagttgtcgcaaggtatttgtatttattcaacaaata
atcgcatcttttgctcaaaccaatccggaacgtggaatcaagttgtatttggaggctgca
ttgacagccgataaacttggttttagcttaccggagggaaatgatcaactagaaacattc
ggttcgatcacgttcgaattatttacacaatcattctcgttgtacgaacagcatgtaatg
gcagatacaagaattcaacgtcggtgtgtaacatctatgatcggaaaattattggcatgc
cgatcattggggaagaaagaatatgaaggattgataatgaaaacatccaagtttgctgct
aagatgatcaaaaagtctgaacaatgcgaaatggttacacgttgcgcacatttattctac
aacgtagtgatcggtggtgacgatgataataatgttgtgtatgcgaatccacaacgttgt
ctcgaatgtttacaacgatcattgaaattagctgattcatgtacgaatgttgatccatcc
aatttaagactctttgtggatttattagactcttactgctacttcttcgaaaagaaaaat
tcgtctattactgggaattatattacaggactggtcgctctcatcaaggaacaagtcaat
agtgctggcggtgacggttctgcgatgtgtcctcctgctgtgggagaagcaaaggcacag
tttttacaaattgtgcgacatatcaaggacatgaaaaagaagaatgatgatacgtctgaa
caattcaaagacatcgacgttagtgccatcgaaacatga
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