Fragilariopsis cylindrus: FRACYDRAFT_213035
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Entry
FRACYDRAFT_213035 CDS
T04784
Name
(GenBank) Coatomer, gamma subunit
KO
K17267
coatomer subunit gamma
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_213035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_213035
Membrane trafficking [BR:
fcy04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
FRACYDRAFT_213035
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRACYDRAFT_213035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
COP-gamma_platf
Coatomer_g_Cpla
HEAT_2
HEAT_EZ
Cnd1
PDS5
TOR1L1_N
AID
Motif
Other DBs
NCBI-ProteinID:
OEU07736
JGI:
213035
UniProt:
A0A1E7EPM9
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MENGDGGGGLLRELQDLGEKFKVDDQDEQYISPYAHLEKATVLQEARVFHDPNIVRENPR
KCCTVIAQLLHLQNTGQYMSSVEGTEVFFGVTKLFMSDDASLRRMVYLFIKDVAETCQHD
DIIIVIQSLFKDVNSDADLYRGNAMRVLARIVDAAILGSIERSFKQAIVDSSSLVSSSAL
VAASFLYDSHADCAIIVRRWITEATEATNSSNEMVQFHAMQLLYQIKQHDKLGVTKLVSQ
YSTRNTLKSPLALVLLVRYTAKLLSDEAQTGRSTLIKQDGSPAAKQGYLFLEASLRHKNE
MVVYEAAYAICNLSGVEPQDLSPAISVLQLFLSSPKPATRYASMRTLAQIANTQPRVVSK
CNEDLEALIGDSNRSIATLAITTLLKTGSENSIDRLLKQISAFLTEIADEFKITVVRSLQ
KLCLTYPNKHRVLVGFMSNFLREEGGFDFKKSIVASIISLIRQVPETTESSLLHLCEFIE
DCEFTRLSTEILHLLGELGPSTSAPARYIRFIYNRVILENAAVRAAAVSSLAKFAAHCPS
LRSSIMTLLKRSLIDEDDETRDRAAISVSILKDAMIANPYVAPTDEDEADDIPDDVPVPG
DTAAYVLLETLPMSFDKLERSMTAYINTPNNDNEITFDVLPIVEDTAEEIAVASEIIDPA
SVVYAIPELANLGRAFRSAPPVMLTESETEYVVQCTKHIFQSHVVLHFNVQNTIEEQRLD
NVTVLIDDSESTSFTASGEIACESIKYGESKNCFTVLERNNTDEPLTTNTFTCELRFTVV
EVDPATGEEEGGTFEEEYPLEDLEITTSDFMAKVTTPDFRKSWETLGNTNEVLEKFALQF
KKMDDAVAAIVSFLGMQPCDGTGTIKPDAGNKPHMLHMSGAFVTGQQVLARAQVAFDGTN
GQGQVILKIAVRSEDEAVSRMVADCIH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggtgatggtggtggtggtttactgcgtgaattacaagatttaggtgaaaaa
tttaaagttgatgatcaagatgaacaatatatttcaccctatgcacatctggaaaaggcc
acagtcttacaggaggcaagagtctttcatgatccaaatattgttcgtgaaaatccaaga
aaatgttgtaccgtcattgcacaattattacatttacaaaatactggtcaatatatgtcg
agtgtcgaaggtactgaagttttttttggtgtgacgaaattatttatgtccgatgatgca
tcactcagaagaatggtgtatttatttattaaagatgtagcagaaacatgtcaacatgat
gatattattattgtcatccaatcgttatttaaagatgtcaatagtgatgctgatttatat
cgagggaatgcgatgcgtgtcctggccagaattgttgatgcagcaatattagggagtatt
gaacgatcgtttaaacaagctattgtggattcctctagtttagtatcctcgagtgcatta
gtggcggcatcattcctttatgatagtcatgctgattgtgctattattgtacgacgttgg
attaccgaagctaccgaagcaacgaattctagtaatgaaatggtacaatttcatgccatg
caattattatatcaaattaaacaacatgataaattaggtgtcacgaaattagtcagtcaa
tatagtactcgaaataccttaaaaagtcccttagcactagtattattagtacgatatact
gcgaaattattatcggatgaagcccaaacgggtcgatcgacattaattaaacaagatgga
tccccggctgcgaaacaaggatatttatttttagaagctagtttacgacataaaaatgaa
atggtcgtctatgaagcagcctatgccatttgtaatttaagtggtgtagaaccacaagat
ttatcacccgctatttccgtactccaattatttttaagtagtccaaaacccgccacacga
tatgctagtatgagaaccttagcacaaattgcaaatactcaaccacgtgtcgtgtcgaaa
tgcaatgaagatttagaagcattaattggtgattctaatcgtagtattgctacattagcc
attaccactttactgaaaacaggatcggaaaatagtattgatcgtttactcaaacaaata
tcagcatttttaacagaaattgccgatgaatttaaaattacagtcgtacgaagtttacaa
aaattatgtttaacatatcccaataagcatcgtgtcttagtgggttttatgtccaacttt
ttaagagaagaaggtggttttgattttaaaaaatcaattgtagccagtattattagttta
attcgacaagtaccggaaacgactgaatctagtttattacatttatgtgaatttattgaa
gattgtgaatttactcgactcagtacggaaattttacatttattgggtgaattaggtcct
agtaccagtgcaccagcacgatatatacgctttatttataatcgtgtaatcttagaaaat
gctgcagtacgtgcggctgctgtctcgagtttagcaaaatttgcggcacattgtcctagt
ctaaggtccagtattatgactttactgaaacgtagtttaattgatgaagatgatgaaaca
cgtgaccgtgcagcaatttcggtgagtatcttaaaggatgcgatgatcgctaatccatat
gtagcaccaaccgatgaggatgaagcagatgatattccagacgatgttcctgtgcctggt
gatacagctgcctatgtcttattagaaacgttaccaatgtcatttgataaattagaacgt
agtatgacagcctatatcaatacaccaaacaacgacaatgaaattacatttgatgttctt
ccaattgtggaagatactgcagaagaaattgctgttgcatctgaaattattgatccagca
tcggtcgtttatgccataccggaactggcgaatttaggtcgtgcattccgttcagcacca
ccagttatgttaacggaaagtgaaacagaatatgtggtacaatgtaccaaacatattttt
caatctcatgtggtattacatttcaatgtccaaaatacgattgaagaacaacgtctggat
aatgtgacagtattaattgatgattccgaatccacatcctttactgcctctggtgaaatt
gcctgtgaatccattaaatatggtgaatccaaaaattgttttacggtactggaacgaaat
aacacagatgaaccattaacaactaatacattcacatgtgaattacgtttcacggtggta
gaagttgatccagccacaggcgaagaagagggtggtacatttgaagaagaatatccatta
gaagatttagaaattacgacgtcggactttatggcaaaagtaactacacccgattttcgt
aaatcatgggaaacattaggtaatacgaatgaagtattagaaaaatttgcattgcaattc
aagaaaatggacgacgcggtggctgccattgtctcattcttagggatgcaaccctgtgac
ggcactggtacaattaaaccggatgctggtaacaaaccacatatgttacatatgagtggt
gcatttgtgaccggacaacaagtattggcacgtgcacaagttgcatttgatggtaccaat
ggtcaaggacaagtcatattaaaaattgctgtacgatctgaggatgaagctgtatcacgt
atggtggctgattgtattcattaa
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