Fragilariopsis cylindrus: FRACYDRAFT_217419
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Entry
FRACYDRAFT_217419 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K14016
ubiquitin fusion degradation protein 1
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
FRACYDRAFT_217419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_217419
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
FRACYDRAFT_217419
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N2
UFD1_N1
DUF5722
Motif
Other DBs
NCBI-ProteinID:
OEU19011
JGI:
217419
UniProt:
A0A1E7FLH4
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MCIVLTIFLLTIFQTAIIAPVSASSSSASLLKSKPFWRDNRLSRYVQNRYESARELAAIE
QQVEDHNARWVASSRDGAEATSKRRLICLPLDERFDPPMGMFSHGHIQTGDKISLPSCFK
STIELNKAEVPWLFKVSRVENDDDDDGPNTRVGIDVVSKGYAAEANIKELVAGPLDCRAP
SNYCFMPWWMMRALGLKPLDQVDIQLITTVPPGSLVKIRPHSSDFSKDISNTQAVLETEL
RHYSSLTKGSTIAFDYNGKRYWFDVEELRSAPKGEKQPMVKVQDCDVATDFLVAKDVVKE
KKRKLEEARRARQEAE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatagttttgactatcttcttattgacgatttttcagacagcaataattgcacca
gtgtcggcatcatcatcgtcggcatctttgttgaaatcaaaaccattctggcgggacaat
cgactttcccgatatgttcaaaatcgttatgaatcagctagagaactcgctgcaatcgaa
cagcaagtagaagatcataatgctagatgggttgcctcttccagagacggtgctgaagct
accagcaaacgtcgattgatttgtttaccgctcgatgaaagattcgatccacccatgggg
atgtttagtcacgggcatatccaaacgggagataaaatatctcttccatcatgctttaag
tcgacgatcgaactaaataaggcagaagttccgtggttatttaaggttagccgtgttgag
aacgacgacgacgacgacggaccgaatacaagagtcggcatagatgtcgtctcgaaaggg
tatgcggcagaagcgaatatcaaggaattggttgccggtccactcgattgtcgtgctcct
tccaactattgcttcatgccctggtggatgatgcgtgcgttaggattgaaaccgcttgat
caggttgatatccaattaattacgacagttccaccaggatcgttggtgaaaattcgtcct
cattcctccgactttagtaaggatatatcgaatacgcaagctgttctggaaacagaactt
cgacattactcctccttaacgaagggttcgaccatcgccttcgactacaacgggaaacga
tattggtttgacgtggaagagttacggtctgctccgaaaggtgaaaagcaaccgatggta
aaggtacaagactgtgacgttgccactgattttttagttgctaaagatgttgtgaaagaa
aagaaaaggaaacttgaagaggcgcgtagagctcggcaagaagccgaatag
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