KEGG   Fragilariopsis cylindrus: FRACYDRAFT_218071
Entry
FRACYDRAFT_218071 CDS       T04784                                 
Name
(GenBank) putative transcription elongation factor B polypeptide 1
  KO
K03872  elongin-C
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    FRACYDRAFT_218071
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fcy04121]
    FRACYDRAFT_218071
   03400 DNA repair and recombination proteins [BR:fcy03400]
    FRACYDRAFT_218071
Ubiquitin system [BR:fcy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     FRACYDRAFT_218071
   Cul5 complex
     FRACYDRAFT_218071
DNA repair and recombination proteins [BR:fcy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     FRACYDRAFT_218071
SSDB
Motif
Pfam: Skp1_POZ BTB DUF6905
Other DBs
NCBI-ProteinID: OEU16917
JGI: 218071
UniProt: A0A1E7FFJ3
LinkDB
Position
Unknown
AA seq 102 aa
MNSADKDDDQGGERVYVKLISMEGHEFFVDKSIATGSSTTIRTMLDGGQFRESTENVINF
PDIAGYILERVIRYMHYKSRYSNSAARIPEFSIEPEYALELL
NT seq 307 nt   +upstreamnt  +downstreamnt
atgaacagcgctgataaggacgacgatcaaggaggagaacgagtatatgtaaaactcatt
agtatggagggacatgaattttttgtagacaaatcaatagcaacgggatcatcgacgact
atccggacaatgttagatggtggacaattccgtgaatcaacagaaaatgtgattaatttt
cctgatattgctggatatatcttagaacgtgttatacggtatatgcattacaaatcaaga
tattcaaattctgcagcacgtataccagagttttcaatagaacctgaatacgcattagaa
cttttaa

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