Fragilariopsis cylindrus: FRACYDRAFT_223131
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Entry
FRACYDRAFT_223131 CDS
T04784
Name
(GenBank) WD40 repeat-like protein
KO
K11293
protein HIRA/HIR1
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fcy03036
]
FRACYDRAFT_223131
Chromosome and associated proteins [BR:
fcy03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
FRACYDRAFT_223131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
Hira
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WDR55
Mcl1_mid
Beta-prop_TEP1_2nd
Beta-prop_WDR11_1st
HIRA_B
Motif
Other DBs
NCBI-ProteinID:
OEU21680
JGI:
223131
UniProt:
A0A1E7FU42
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MVVAEVPLWVVHSNNANAAIAPPGGSADHKATSSSTTSTNPGSSSVNNTTSNKSSMERAS
ESLTLLDDTNQRGSSSSSGNNGLQKAAIYSVDVHGTKFATGGGDGTVRIWNVNALFPKPK
IFIKSHYNKRKNPLLGSTTMTSTASADPNNTTINTINTASAMNNYESSGESSHEETGGEE
TPNSSPEKSVSGEEEEEQQSKQQQGETTTTTTRRRNGEENTSSLSSSQQQDPVHDLSNVV
RRKKDDSVAAAAAASAVVAPTSSPVNNNNSNKEDNSNSNSNSQQRNPTTSYRKQKQPLTT
DRLLCTLSAHTGSSVLAVRFSNNGKYLASAGDDAVVCIYAQQKNPNGGNIVPRGNLENHG
AAVEHWVRIKLCRGHGLDAVGLAWAPDDSHLVSCSLDSNTPIIVWKLTDLHDHNDHTVTN
YSNVICNPYKILGKGIHTSTVKGVTFDPAGTYLASSGDDPSVCIWRAHDDWGLEKRIDSK
SGIFRKWNGVDEGGKNIINTLSSQSLFRRLSWSTDGAYICTTNAVVKNKNVASTISREGW
AVSNDKGTASGAVNLVGHKQPVVASRHCPYLLNARTSSKKSSKNNDSSSNKVSSDDNHGD
NDSDDSDSEPEYSTLLALGDKKGFVTVWSTRKSRPLFKIQCSESRCTVTDLSWGRLSSNS
SNGERDQLGDLMLIVSLLDGQVVALRFGIPDEFGKLLKPTEQARVFQVRYGIDLNDSGTG
RLGGRRRLFVGDNSGPKLIENPLQFSFENRTNADDADDENENDNENNANNDNTAATQQKE
LLSSEEIRARQSVSRSKGGKKRIQPLLMQTTALIPPTKKPKLSSDAAPKTMADTLETAME
LAEKAASGALAGASGSALPCTVLSISKTGQTLWKDQLLGSSCSAIAASKSWLVVGTSDGC
VQIYGTSPTIGWASGSSFRSHPPYILGRPIVALHLREQSSSSQDKEQIRTELLVVTSDGR
FAVYVLEPRFKLQYKGSLLPAMTHMLLSADLETDLYLPKLARIQLTETNRLLLLLSLHSV
TSSSDGTGGGRGGGTNQPTSVGAGGSLQGFIYDTESDLWMRVADSRFVLSDFYNMLPSMS
SSSSKKTSAGELSKLDDSVRMGAGTSTLQRSRRQHNDDLSNNDVASRSHCEDRMSCAVAL
GAASEFEYWFSKYIKILSLTGNESMLRLVIDIKGESSHGTSNISAAAAATASTTTVAATS
SSSTSSYCWWLSESPKVLNYDRVKLVRTVVIPEMSKNRSLQRITNEIAIEIDSLE
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcgcggaagttcctttatgggttgttcattccaacaatgcgaatgctgctatc
gcaccgccaggcggaagtgctgatcataaagcaacatcatcatcaactacttccacaaac
ccagggagtagtagtgtgaataatactactagtaataaatctagtatggaacgtgcctcc
gaatcattgacacttctggatgatacgaatcagcgtggtagtagtagtagtagtggaaat
aatggattgcaaaaggctgcaatatatagtgtggatgtacatggtacaaaatttgcaacg
ggtggtggagatggtacggtccggatatggaatgtcaatgcattatttccaaaaccaaaa
atattcattaagagtcattacaataaaagaaaaaatccattactagggtccacaacaatg
acatcaacagcatcagcagatccaaataatacgacgattaatacgattaatactgctagt
gcaatgaataattatgaaagtagtggagaatcttcccacgaagaaacaggaggagaagaa
acgccgaatagtagtcctgaaaaatcagtatcaggggaggaggaggaagaacaacaatca
aaacaacaacaaggggaaacaacaacaacaacaacaagaagaaggaatggggaagaaaat
acatcatcattatcatcatcacaacagcaagatcctgttcatgatttatctaacgttgta
cgacgaaaaaaggatgattcagtagcagcagcagcagcagcatcagcagtagtagcgcca
acatcttctcccgtcaacaataacaacagcaataaggaggataacagcaatagcaatagc
aatagtcagcaacgcaatcctactacttcttataggaaacaaaaacaaccgcttactact
gatcgattgttatgtacattatcagcacatactggttcctctgtattagcagtacgattt
tcaaataatggtaaatatttagcatctgctggtgatgatgcagttgtatgtatttatgca
caacaaaagaatcccaatggtggtaatattgttccgagaggaaatttagaaaatcatggc
gcagctgtagaacattgggtacgaatcaaattatgtcgtggtcatggcttagatgccgtg
ggattagcatgggcacccgatgattcacatcttgtgtcttgttccttagattccaataca
ccaattattgtgtggaaattaacggatttacatgaccacaatgaccataccgtcacaaat
tattcgaatgttatctgtaatccatataaaatattaggaaagggtatacatacatccact
gtgaaaggtgtgacattcgacccagctggtacctatcttgcatcgagtggtgatgatcca
tctgtctgtatttggcgggcacatgatgattggggattagaaaaacgtattgattccaaa
tctggtatttttcgtaaatggaatggagtagatgaaggtggaaagaatattataaataca
ttatcaagtcaatcattatttcgaagattgtcatggagtacagatggtgcctatatctgt
accacgaatgctgttgttaaaaataaaaatgtggcatcgacaatatcacgtgagggatgg
gctgttagtaatgataagggtactgcatctggtgcagttaatttagttggacataaacaa
cctgttgttgcatcacggcattgtccatacttattgaatgcaagaacatcgtccaaaaaa
tcatcaaaaaataatgattcttcttctaataaggtttcatcggatgacaatcatggcgat
aacgatagtgatgatagtgatagtgaaccagaatattctactttattagcattaggtgat
aaaaaaggattcgtaaccgtatggagtacaagaaaatcacgtccgttatttaaaatccaa
tgttctgaatcacgttgtacggtaacagatctttcatggggacgtttatcatccaattca
tccaatggcgagagagatcaattaggtgatttgatgttaattgtatcattattagatgga
caagttgttgcgttacgatttggtatccccgatgaattcggtaaattattaaaaccaact
gaacaggcacgtgtatttcaagtacgatatggtattgatttaaatgattccggtaccggt
cgtttaggtggacgtcgacgattatttgttggtgataattcaggaccgaaacttatcgaa
aatccacttcaattttcatttgagaatcgtactaacgccgacgatgccgacgatgaaaat
gaaaatgacaatgagaacaatgcaaataatgacaatactgctgctacgcaacaaaaggaa
ctactatcttctgaagaaataagagcacgacaatcagtaagtcgatcaaagggcggaaag
aaacgtatccaacctttgctcatgcaaactacagctctaatcccacccaccaagaaacca
aaacttagcagcgatgctgctccgaagacgatggctgatacgttggaaactgccatggag
ctagctgaaaaagctgcatcgggagcgttggcaggggcgtctggtagtgcattaccatgt
acggtgctttctattagtaagaccgggcagaccctatggaaggatcagctattaggaagt
tcctgttctgccattgctgcatcgaaatcttggttggttgttggtacatcagatgggtgt
gttcaaatttatggtacatcacccacgattgggtgggccagtggtagttccttccgttcg
cacccaccatacattctaggacgaccaatcgtggctctgcaccttcgagagcaatcatca
tcatcgcaagacaaagaacagatccgaactgaattattggtcgttacgtccgatggtcga
ttcgctgtctatgtgttagagccacgatttaaacttcaatacaagggaagtcttttacct
gccatgacacatatgttactatctgctgatcttgaaacagatttgtatttaccaaaattg
gcacggatccaactgacagaaaccaaccgattactattattgctatcacttcactcggta
acatcttcctcggatggtacgggaggaggaagaggaggaggaacgaatcaaccaacttca
gtcggtgcaggtggatctttacaaggctttatttatgatacagaatccgatttatggatg
agagttgctgatagtcgattcgtattgtcggacttttacaatatgctcccttcgatgtca
tcgtcgtcttcgaaaaagacttcggctggcgaattgtccaaattagatgattctgttcgt
atgggtgctggtacatcaaccttacaacgttctcgacgacaacataacgatgatttatct
aacaatgatgttgctagtcgatctcactgtgaagatcgtatgtcatgtgcggttgcttta
ggagcagcatctgaatttgaatattggttttctaagtatatcaaaatcttgtcgttgaca
gggaatgagtccatgctacgattagtgattgatattaaaggggaaagcagccacggtact
agtaatattagtgctgcggctgcggctacggcttctactacaactgtagccgcaacatcg
tcgtcatctacttcttcttattgctggtggctatcggaatctccgaaagtacttaattat
gaccgtgtgaaattggttcggaccgttgttattcctgaaatgagtaagaatcgtagtctg
caacgaataacaaacgagattgccattgaaattgattcgttagagtag
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