KEGG   Fragilariopsis cylindrus: FRACYDRAFT_224661
Entry
FRACYDRAFT_224661 CDS       T04784                                 
Name
(GenBank) WD40 repeat-like protein
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    FRACYDRAFT_224661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fcy03009]
    FRACYDRAFT_224661
Ribosome biogenesis [BR:fcy03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    FRACYDRAFT_224661
SSDB
Motif
Pfam: UTP15_C WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 EIF3I Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_RIG_1st NBCH_WD40 Beta-prop_WDR11_2nd Beta-prop_IFT140_2nd Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N
Other DBs
NCBI-ProteinID: OEU20118
JGI: 224661
UniProt: A0A1E7FPM9
LinkDB
Position
Unknown
AA seq 650 aa
MGTPSTRNYKTTSTLQSKRHTVASVTLGQDGFADTNEARYWTQKLGIGSSKKYDTSKNAK
KYAHSRSLYIPPNREAIAQQVLFGPLLTSKHPPFAVVCGPRVNLYGTSTTGSSFVRALYQ
SGNTKTNSSSNENNPLVINELEPDRSVQTGGNLALGASFRNDGRLLAVGTDAGEARICDV
TMRSTIATFSSNTMPIRSIEWFRNGQYILTGGDDGIARIWNLSSTQKTKPMIQLKGHGDV
IRCTALWQQEKKKKTATATSTQQQQWTELAVTGSYDHTIRVWNVHNVGVEQQKPKQNNMS
MMMMMDVDDDGSGKKEAEKEDEQSRCLAVLNHGAPVEALCFLKSENNPDVPMWLLSAGGT
TIKVWNPLSGQCIATVTTHHRKTITSLLPVLRTNYEDDSTKMKTISQRILSASLDGVIQI
HSWDPKTGAMRHLYSTKLTDSITSVATDTTGDRFAFGTVSGHVLFKMKGPSVTDKKSTKV
PKAGTYSFFQRGMNADPNSGDYTVTTKTKKQRKLNKYNFALKKFRYAEALDEVISTRNPK
NIAGVLEELGKRRGLTHALSNRDEETLEPILRFVSRYIKKPDYTSILVGVAHILIDIYGD
VAGESDEVDGLFRKLKHQIKLECMAQKSLMLLVGQIEASMTGSATVTPSL
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgggaacaccgtcaacacggaactacaaaacaacatcgacactacaatcgaaacgacat
acggttgcatcggttacgttaggacaggatggatttgctgatacgaatgaggcacgatat
tggacacaaaaacttggtattggatcctctaaaaaatatgatacatccaaaaatgcaaaa
aagtatgcacattcaagatcactttatataccaccaaatcgagaagctattgcacagcaa
gttttatttggaccgttacttacatccaaacatccaccctttgcggttgtttgtggtcca
cgtgttaatttgtatggtacatccacaacgggttcatcttttgttcgtgctttatatcag
agtggtaatactaagactaatagtagtagtaacgaaaacaatcctcttgttattaatgaa
ttagaaccagaccgatctgtacagacgggtggtaatcttgcattgggtgcatcatttagg
aatgatggtcgattattggcggttggtaccgatgctggtgaggcacggatttgtgatgtc
actatgagatcaacaatagcaacatttagttcaaatacaatgccaatccgatcaattgaa
tggtttaggaatggacaatatatattaacgggtggtgatgatggtattgctcgaatatgg
aatcttagctcaacacaaaaaactaaaccaatgattcaattgaagggtcatggtgatgtg
atccgatgtacagctctttggcagcaagaaaagaagaagaaaacagctaccgcaacgtct
acacaacagcagcaatggacagaattggctgtaactggaagttacgatcatacgattcga
gtttggaatgtccacaatgtaggagtagaacaacaaaaaccaaaacaaaataatatgtca
atgatgatgatgatggatgtggacgacgatggtagtgggaagaaggaggcagaaaaagag
gacgaacaaagccgctgtcttgccgtacttaatcatggagcaccagtagaagcactttgt
tttcttaaatcggaaaacaatcctgacgtaccaatgtggttgttgtcagcgggtggtacg
actatcaaagtatggaatccattaagtggacaatgtattgcaacagttactactcatcat
cgtaaaactataacaagtctactaccagttttacgaactaattatgaagatgactcaaca
aagatgaaaacaatttcgcaacgtatattatcagctagtttagacggtgtaattcaaatc
cattcatgggatcccaaaactggtgcaatgagacatttgtatagtactaaattaaccgat
tctattaccagtgttgctaccgatacgactggtgatcgatttgcattcggtacagtgtct
ggacatgtattatttaaaatgaaaggtcctagtgttactgataaaaaaagcactaaggtc
cccaaggctggtacatacagcttctttcaacgtggtatgaatgctgatccgaattcaggt
gattacactgtaacgactaaaacaaagaaacaacgcaaattaaacaagtacaattttgca
ttgaaaaaattccggtacgcagaagcattagatgaggtcatttcaacaagaaatcctaag
aatattgctggtgtattagaagaacttggtaagcgacgtggactgacacatgcattgtct
aatcgtgatgaggaaacattagaaccgattctgcgattcgtttcacgatatattaaaaaa
ccagattatactagtatcttggttggagtggcgcatatccttattgatatttatggtgac
gtcgcaggggaatcggatgaagttgatggattatttagaaaattgaaacaccagatcaaa
ttagaatgtatggcacagaaaagtcttatgttacttgttggacaaattgaagcatctatg
actggttctgctactgttacgccatcgttgtag

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