Fragilariopsis cylindrus: FRACYDRAFT_225801
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Entry
FRACYDRAFT_225801 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcy03016
]
FRACYDRAFT_225801
Transfer RNA biogenesis [BR:
fcy03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
FRACYDRAFT_225801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
UDPG_MGDP_dh_N
ApbA
Ldh_1_N
LTXXQ
Motif
Other DBs
NCBI-ProteinID:
OEU16679
JGI:
225801
UniProt:
A0A1E7FET0
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MASSYPGKSLTLTGCFLAGVTSAARDQKSSSSTSSPSNTDSSSSSVTVPEHMRQEQLSRH
ALYFGNKNMDLIRSSNVCVIGLGGVGSHCAMMLARGGVEYLRLIDFDQVTLSSLNRHACA
TLKDVGISKVESVKKVCLELGLKDKNIDDRVEMYNTETGPSLLSTVTIPTKDGEDDSNQQ
KWDVVIDCIDDVPTKAALLAYCIKNKIRVLSCMGAGGKSDMTRLHISDLQTAAKDPLASK
LRQTMKKNMKKTRAAEEAKADSSGGTGEKSNEKDYDDSYLEDMDQLTIIYSSEKTVAKLA
DFTDEQKAERDKSQFGAVDGMRIRVLPVLGPLPAIMGQSLAAMTLCELGKKPISQPVTGE
RVGRNVRHRVYQHLTSREHKIKTGKIVPFDNVSYTGTVEIDSDDVEYLYGVWRNRCAITG
ARLGCVLALARWDTSKPATSDNLVLMSSHALKDYDTLGKSSIKSSIQERIESRLAICRDL
NCDA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcctatccgggtaagtctcttacactaacgggatgcttccttgcgggtgta
acttcagccgctcgggatcaaaaatcctcgtcgtctacttcttctcccagtaatactgat
tcttcttcttcttctgtcaccgttcccgaacatatgcgtcaagagcagctatcaagacat
gcgctctattttggaaacaaaaatatggacttgatccgatcgtccaatgtttgtgtcatt
ggcttaggcggcgttgggtctcattgtgctatgatgttagcccgtggaggagtagaatat
cttagacttatcgactttgatcaagtcacactatccagcttgaatcgtcatgcttgtgca
acattgaaagatgtcggaatttcaaaggtcgaaagtgtcaaaaaagtgtgtttagagctt
ggtcttaaagataaaaatatcgacgatcgtgtcgagatgtacaacaccgagacggggccg
agtctattgtccacagtgacaattcccactaaggacggagaagacgacagcaatcaacag
aaatgggacgttgtcatcgactgtatcgatgatgttcctactaaggcggcactcttggca
tattgcataaaaaataagattcgagttctttcgtgcatgggtgctgggggcaaaagtgat
atgacccgtctacacatctccgacttacaaaccgcagcaaaagatcctttagctagcaaa
ttgcgccaaacaatgaaaaagaatatgaaaaaaactcgagcagctgaagaagctaaggct
gacagtagtggtggtaccggcgagaaaagcaacgaaaaagactacgacgattcgtatctt
gaggacatggatcaactaacgattatttacagctccgaaaagaccgtcgctaagttggcc
gacttcaccgatgaacaaaaggccgaacgtgacaaatcgcaatttggtgccgtggatggg
atgagaattcgagttctaccagttttggggccattgcccgccatcatgggacagtcgttg
gcggcaatgaccttatgtgagctaggaaagaagccaattagccaacctgttactggagaa
cgtgtggggcgaaatgtcagacatagagtatatcaacacttgacgagtcgagaacacaag
ataaagactggtaaaattgtgccctttgataacgtttcatacactggaacggtagagatc
gacagtgacgacgttgaatatttgtacggtgtatggagaaatagatgtgccatcacaggt
gcaagattggggtgtgtccttgcattggctcgatgggacacatcaaaaccagcaacatct
gacaatctagtcttgatgagctcacacgccctaaaggattatgacaccctagggaaaagt
tcaatcaaatcttctatacaggagcgcatcgaaagtcgtttagcgatatgccgagatctg
aattgtgatgcatga
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