Fragilariopsis cylindrus: FRACYDRAFT_226243
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Entry
FRACYDRAFT_226243 CDS
T04784
Name
(GenBank) NOL1/NOP2/sun family putative RNA met
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_226243
Enzymes [BR:
fcy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
FRACYDRAFT_226243
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
FRACYDRAFT_226243
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
FtsJ
RsmF-B_ferredox
PCMT
Methyltransf_31
Mg_chelatase_C
BMT5-like
Motif
Other DBs
NCBI-ProteinID:
OEU15587
JGI:
226243
UniProt:
A0A1E7FBP8
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MAGKISKSPKGGRRSPSVEKKGRSTSVESKGGRRSTSVEKKGGRRSTSVGKKGNVENKEP
PAAKNRRDSSSSRNDDDDDEAFGNDDEVDDDDMSDDEELEVERQSRLLDARRVEEAEEAE
EEYRETIATNTSIYHLPLKEELDKDIDRVVPPSELKSHIESILEVLADFKNRREPERSRK
EYVDQLGLFIAELYGYLPELVEYFLTMFSPSEALEFVDYSDKVRPMVIRTNTLKTRRKDL
ALALMKRGVSLDPLAGWSKVGLKIMESPVPVGATPEYLSGHYMLQSAASMCPVLALAPQP
KERVLDMSAAPGGKTSYIAQLMRNTGVIFANDLRSDRQKATVANMHRLGVKNVITCMHDG
RKLSKLFKQFKFDRVLLDAPCSGLGVISRDPSVKVQRTIADVKKTAHLQKELLLAAIDVL
NHKSKTGGVMVYSTCSISVAENEEVVNYALSKRDIKIIDTELDFGTPAFTRYQQKRFHPS
IAKTRRFYPHVHNMDGFYVAKIQKLSDKIKGESEPSKKEDGVDEKSNVDELDAERKTKKD
KISVPPTREVNTNKKNDKKKNAKMTKPRRMKVEVN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaaatttctaagtctcctaagggtggacgccgttcaccgagcgttgaaaag
aaaggtcgttcgacaagcgtcgagtctaagggcggacgccgttctacaagcgtcgaaaag
aagggtggacgccgttctacaagtgtcggaaagaagggaaacgtcgaaaacaaagaacca
cctgctgcaaagaaccgacgcgatagtagtagtagtagaaacgatgatgatgatgacgag
gcatttggtaacgatgatgaagtcgacgacgacgacatgagtgatgacgaggaattagaa
gtggaaaggcaatcacgtctcttggatgcaaggcgagtggaagaggcggaagaagctgaa
gaagaatatcgcgaaacaatcgcaacgaacacttctatctatcatctaccattaaaagaa
gaactcgataaagatatagatcgagtcgttcctccctcggaactcaaatctcatattgaa
tcaattctagaagttttagctgacttcaaaaaccgtagagaacctgaacgctctaggaag
gaatatgtcgatcaactcggacttttcatagcagagttgtacggttaccttccagagttg
gttgaatatttcctaaccatgttcagcccctcagaagccctcgagtttgtggattattct
gacaaagtgcgtcccatggtcatcagaacgaataccttgaaaacccgtagaaaggatctc
gccttggccctgatgaagagaggagtatcgttagatcccttggcaggctggtccaaggtc
ggattgaaaattatggaaagtcctgtccccgttggtgctacacctgaatacttaagtgga
cactatatgcttcaaagtgcagcatccatgtgtccagtcttggcgctggcacctcaacca
aaagaacgtgtgcttgatatgtcagcagctcctggtgggaaaacatcgtacatcgctcag
ttgatgcgcaataccggagtaatttttgcaaacgatcttagatccgatcgtcagaaggcg
accgtcgcaaacatgcatcgtttgggtgtcaaaaatgtcattacgtgtatgcacgacgga
agaaaattatccaaactcttcaagcaattcaaatttgatagagtgttgttagatgcacca
tgttcaggtctaggagttatcagtcgtgatcctagcgtgaaagttcagagaacgattgcc
gatgtaaagaaaacagcgcatcttcaaaaagaactacttttggcagcgatcgatgtactc
aatcataaaagcaaaactgggggtgtaatggtgtattcaacttgtagtatcagcgtcgca
gaaaacgaagaggtagtcaactacgctctctcgaaaagagatattaagattattgatacg
gaacttgattttggtactccggcattcacaaggtaccaacaaaagcgtttccatccatcc
attgccaagacacggcgattctatccacacgttcacaatatggatggattctacgtggca
aagattcaaaaattgagtgacaaaattaagggcgaatcggaaccatcgaagaaagaagat
ggagtcgacgaaaaaagcaatgtcgatgagctcgacgcagaaagaaaaacaaagaaagat
aaaatatctgtaccacccacacgggaagtaaatactaacaagaaaaatgataagaagaag
aatgcaaaaatgaccaaacctcgaaggatgaaggttgaggtaaattaa
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