Fragilariopsis cylindrus: FRACYDRAFT_226979
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Entry
FRACYDRAFT_226979 CDS
T04784
Name
(GenBank) t-SNARE
KO
K08486
syntaxin 1B/2/3
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
FRACYDRAFT_226979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fcy04131
]
FRACYDRAFT_226979
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fcy04147
]
FRACYDRAFT_226979
Membrane trafficking [BR:
fcy04131
]
SNARE
Syntaxin (Qa)
Stx-PM
FRACYDRAFT_226979
Exosome [BR:
fcy04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
FRACYDRAFT_226979
Exosomal proteins of other body fluids (saliva and urine)
FRACYDRAFT_226979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
SNARE
Pepsin-I3
CsoSCA_cat
Motif
Other DBs
NCBI-ProteinID:
OEU14036
JGI:
226979
UniProt:
A0A1E7F7B0
LinkDB
All DBs
Position
Unknown
AA seq
263 aa
AA seq
DB search
MSSFFSEVDRVNADIKAIAKASKEIDSINEQSMRSTTTAEEQKLSKKLGPLIGTTNKSAK
RTKDVLGLLKQETDKLKEEGKLNASNVRVRENMNTTLTKKFIDEMKIYQQSQQKYKTDIK
KKVKRQVQVIKPDATDEEIDDVMKSEGGRDALYKQSILAGGVNDQIKTTYAKVAGKYQDV
LTLEQSVAELHQMFLDFALLTEQQGELLDQIEFNVTQATDYVEEANVETHTAIEYQKSIR
KKQCWILLIVAVAAAIVIFFIVK
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccttcttcagtgaggtggatcgtgtcaatgctgatattaaagccatagcaaaa
gcctcgaaagaaattgacagtatcaacgaacaatctatgagatcaacaaccactgcagag
gaacaaaaactttcaaagaaactcggaccactcatcggcacgactaataaaagcgccaaa
cgtacaaaagatgtactgggactgctcaaacaagagacagacaaactcaaggaggagggt
aaattgaatgcttccaacgtgcgtgtccgagaaaacatgaacacaacattgacgaaaaaa
tttattgatgagatgaaaatctatcaacagtcacaacaaaaatataagactgatattaaa
aagaaagtaaagcgacaggtacaggtgatcaaaccggatgcgaccgacgaggagatcgat
gatgttatgaaaagtgaaggtggacgagatgcgttgtacaaacaaagtattcttgctgga
ggtgttaacgatcaaataaaaactacatacgccaaagtggctggaaagtatcaagatgtt
ttaacgttagaacaatcggttgcagaactacatcaaatgtttttagattttgcgttacta
acagaacaacaaggagaactgttagatcaaattgaattcaacgtaacgcaggcaacagac
tacgtcgaggaagctaatgtcgagacccacacagctatcgaatatcaaaaatcgattcgg
aaaaagcaatgttggatcctcctcattgtggctgtagccgctgctatagttatatttttt
attgtaaaataa
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