Fragilariopsis cylindrus: FRACYDRAFT_233147
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Entry
FRACYDRAFT_233147 CDS
T04784
Name
(GenBank) class II aaRS and biotin synthetase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy00780
Biotin metabolism
fcy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
FRACYDRAFT_233147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fcy03000
]
FRACYDRAFT_233147
Enzymes [BR:
fcy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
FRACYDRAFT_233147
Transcription factors [BR:
fcy03000
]
Prokaryotic type
Helix-turn-helix
Other families
FRACYDRAFT_233147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
NDUFA12
CRISPR_assoc
LplA-B_cat
Motif
Other DBs
NCBI-ProteinID:
OEU22983
JGI:
233147
UniProt:
A0A1E7FYT4
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MLLLVGNSNNNRKSRSSRSNTVISLSSLASSFLTPSLLVSKTSSTCCWSILILLLLSGSS
GGFGRGGIITYTTSSSSILFADALLLQPVMATSSPSSSSSSHDETATTTNTCKKNNQICT
NNNENQNQNDNNDHDNNNIQEIIGKHHPDDDQLLLYHYESTPSTQDEAKKIAKQLSSQLS
SQLSESSESKPPPPPPPRTFCVTTTIQSNGKGTTGRKWLGTPGNVFVTIGIPVNVWMQEM
MQNRNIPLTLLPLKIGDLTASLINSTLTKQQSQSKQQPPIVTVKWPNDVLVDGKKISGTL
IESSDDWFLIGIGINVAYAPPISKTGTDYGRPSQQEIDIARDMGVQLALDFHRWIYDSDE
NAESIVEGWKNWLDYDMELIMRNDKNPPLDEIEIDNQQQQQQQQKQKQTQTERVVKIIDV
LPDGRIRVQNQDEFGIMEVLVSDYFV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgctgctattagtcggtaatagcaacaataacagaaaaagcagaagcagcaggagtaat
actgttatatcattatcatcattagcatcgtcatttttgacaccctcgttgttggtgtca
aaaacatcatccacctgttgttggtccatcctgatacttctcctgttaagtggtagcagt
gggggttttgggcgaggaggaataattacttatacaacaagtagttctagcatattattt
gcagacgcgttactattacaaccggtgatggctacatcatcaccatcatcatcatcatca
tcacacgacgaaacagcaacgactacgaatacttgtaagaaaaataatcaaatatgtaca
aacaacaacgaaaatcaaaatcaaaatgataacaacgatcacgataacaataatatccag
gaaataataggaaaacatcatcctgatgacgatcaattattattataccattacgaatca
acaccatcgacacaagacgaagctaaaaaaattgctaaacaattgtcgtcacaattatca
tctcaattatctgaatcatctgaatctaaaccaccaccaccaccaccaccacgtacattt
tgtgttacaacaacaatccaatcaaatggaaagggtaccactggtagaaaatggttaggc
acaccagggaatgtatttgttactattggtatacctgttaatgtatggatgcaagagatg
atgcaaaatcggaatataccattaacattattaccattgaaaattggtgatttaacagca
tcattaattaatagtacattaacaaaacaacaatcacaatcaaaacaacaaccaccaatt
gtgacagtcaaatggccgaatgatgttctagttgatggaaagaaaatttctggtacatta
atagaatcatctgatgattggttcttaattggtattggtattaatgttgcatacgcacca
ccaatatctaaaacaggtacagattatggtcgtccatctcaacaagagatagatattgca
cgtgatatgggtgtacaacttgcacttgattttcatcgatggatatatgattctgatgaa
aatgcagaatccatcgtagaaggatggaaaaattggttagattatgatatggaattaatt
atgagaaatgataaaaatccaccactggatgagattgagattgataatcagcagcagcag
cagcagcagcaaaaacaaaagcaaacgcaaacggaacgagtagtgaaaattattgatgta
ttacccgatggaagaatacgtgtccaaaatcaggatgaatttggtataatggaggtcctt
gtttctgattactttgtttaa
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