Fragilariopsis cylindrus: FRACYDRAFT_234458
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Entry
FRACYDRAFT_234458 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcy03009
]
FRACYDRAFT_234458
Ribosome biogenesis [BR:
fcy03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
FRACYDRAFT_234458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDCD2_C
Motif
Other DBs
NCBI-ProteinID:
OEU20826
JGI:
234458
UniProt:
A0A1E7FRQ6
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MFLLTQLRLKQQQQQQQSTSSDKYVLVFTCPHEGCFGQLVFDKGFSSGGGQGVVKCFEKR
IVIADNEDNKIKEQKNPTTGSSWCTDSKAGGEDDTTKNDDDGDDWGMGECDDERMNLENA
VAAMENKLDKDGALVMATTTKKATSKPKSKPSSSEALLNAFGCYMLKMQNEPMSTRSMFE
DDDDVGLSESDEKIRNMLARYMAEEEDEDILGALRGSGACGGGGGNGATEEDERLSEEDR
ILRSFQDRQRRAARQVIRYVPGGVPLWSIPDKNRKSGKTLWNVPKCSCCGEQRKLELQVL
PSILDVLEVDKWQAGSKEKAEIRNSMALDDLLSNGVNFGSIAVFTCPNASCEIQEKEAFV
VIQKSVDVLPEKKEQTNKIDVKDSTAASKAVVEDLDDDAEFEQDV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgcttacacaattacgattgaagcagcagcaacagcaacagcagtcaacatca
tctgataaatacgtacttgtttttacttgccctcatgaaggatgttttggacaacttgtt
tttgacaaaggattctcatcgggaggtggacagggtgtagtgaagtgtttcgaaaagcga
attgttattgctgacaatgaagataacaaaatcaaagaacagaaaaacccaacaactgga
tcttcttggtgtacggattccaaagcaggtggtgaagacgatactacaaaaaatgatgat
gatggcgacgactggggaatgggagaatgcgatgatgaaagaatgaatttagaaaatgcc
gttgcggctatggaaaacaagttagataaagatggtgcacttgttatggctactactacc
aaaaaagctacatctaaacctaaatcgaagccatcatcatcggaagcacttttgaatgcc
ttcggttgttatatgctgaaaatgcaaaacgagcctatgtctaccagatcaatgtttgaa
gatgacgatgatgttggattatcagaaagtgacgaaaaaatacgaaatatgctagcaaga
tatatggccgaagaagaagacgaggatattctcggtgcacttcgagggtcaggtgcgtgt
ggcggtggtggcgggaatggtgcaactgaggaagacgaacgcttatcggaggaagatcgt
atccttcggagttttcaagaccgtcaacgacgtgctgctcggcaggtaattcgatacgtt
cctggaggtgtacccctttggtctatccccgataagaatcgcaaatcaggtaagacgtta
tggaacgtaccgaagtgttcatgttgtggggaacaaagaaaacttgaattacaggtattg
ccgtctatattggatgtgcttgaggttgacaaatggcaagcagggagcaaggaaaaggca
gaaattcgcaactcaatggctcttgacgatctcctatcaaatggagtaaattttggttcc
attgctgtgttcacttgccccaacgcctcgtgtgaaattcaggagaaggaagcattcgtt
gtgattcaaaagagtgttgatgttttaccagaaaagaaggaacaaaccaataagattgat
gtgaaagactccactgctgcatccaaggcagtggtggaagatctagatgatgatgctgaa
ttcgaacaagacgtataa
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