KEGG   Fragilariopsis cylindrus: FRACYDRAFT_235012
Entry
FRACYDRAFT_235012 CDS       T04784                                 
Name
(GenBank) hypothetical protein
  KO
K12825  splicing factor 3A subunit 1
Organism
fcy  Fragilariopsis cylindrus
Pathway
fcy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fcy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FRACYDRAFT_235012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fcy03041]
    FRACYDRAFT_235012
Spliceosome [BR:fcy03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    FRACYDRAFT_235012
 Complex B
    FRACYDRAFT_235012
 Complex C
   U2 SnRNP specific factors
    FRACYDRAFT_235012
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-ProteinID: OEU21388
JGI: 235012
UniProt: A0A1E7FTA6
LinkDB
Position
Unknown
AA seq 807 aa
MMVITGIIRPPPDIRVVADRTAEYVAKNGRGFESRILSSAKGKTPKFAFLQPTSPFHAYY
EDKIKSFQNPVEEVDDENKKDDGNKGVKSSETKSSAADTNKDKNKKSDDTASTSAGSTSK
RTKDVKQKASLIDPIAKAILGQRTKITDHLKKEREKRRKAASPKETADGDNNNNSTTEKD
SPEQQSAPENNNNKFLPLPPPPLPLETVHVVAPYNLTPTQIETIQLVAQFVAMDGKGGPF
LPALCSREWSNPTFGFCQPRNIHFAYFSALVDAYRKIIHDYTSADSMVATIQNRDGSAAD
ETTTVKIKTKEEEEKKQSPQAPTVVYDAQAALDDAAYRTEYERELERRRLKQQQQHANVM
EDGEIANVIDWHDFVVVETIDFPIEEQVDVELSMLPTKTATTTTSTASGMVTDNDGGAAS
ASADNAMEESSDDDDGDDDAGEETIRVVPSYTPKVVGTFDPSMSRAIDPITGKSVSVADM
PEHMRIQLLDPKWAEERKKFQDKQKDSNLVGGDAIVANMARFSGGNDIDNNSNNATSGVA
NGATTTQMSTPSVAAAITTAPRMKRPPPPPPPPPPFGATATVTNTTPVGFPGASTGTGPV
INTAGEPSMKKLRTNASDPRLGPLPSQPQHKVTIAPVPPSTSTLSGSNIGTNNNNNSNAT
PSSVTDSSPTIGNPTTTTDATQGITDTTAIDTTEPAEEKKLLPANEFIASLDEPVVELQV
RVPNDQAQQSWNFFGQTLTLTSVDVTSKVKDVKDILSKSHLNGMPPNKIQLKDPNGGFLS
NNATLATLNIGPTAILELKTKQRGGRK
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgatggtcataaccggcattatccgaccaccgcctgacattagagttgtggccgatcgg
actgctgagtacgttgctaaaaatggtagaggattcgaatcgcgtatcttgagtagtgca
aaagggaagacaccaaaatttgcgtttttacaaccaacgtcaccctttcatgcctactat
gaagacaaaatcaaatcttttcaaaaccctgttgaagaagtcgacgatgagaacaagaag
gacgatggtaacaagggagttaaatcatctgagacgaaatcttctgctgccgatactaat
aaagacaaaaataagaagagtgatgatactgctagcacgtcggcaggatcaacgtcgaaa
cgaacgaaggacgtgaaacaaaaggctagtcttattgatcccatcgcaaaggcgatattg
ggacagcgcacaaaaattacagaccatttaaagaaagaacgcgagaaacgtcgaaaagcg
gcatcaccaaaagaaactgctgacggtgacaacaacaacaactctactaccgaaaaagac
agtcctgagcagcaatcagcacccgaaaataacaacaacaaatttttacctttgccacct
ccaccattaccacttgaaacagttcacgttgttgcaccgtataatttaactcctacccaa
attgaaactatacaacttgttgcacaatttgttgcgatggatggtaaaggtggaccattc
ttaccggcattatgttcacgtgaatggtcaaacccaacgtttggtttctgccaaccccga
aacatccattttgcatacttttcggcattagttgatgcatatcgtaaaataatccatgat
tatacatcggcagatagtatggtagcgacaattcaaaacagggatggttccgccgccgat
gaaacaacaactgtcaaaattaaaaccaaagaagaagaagaaaagaaacaatcaccacaa
gcaccgacggtagtttatgacgcacaagccgcgttggatgatgccgcgtatcgaactgaa
tacgaacgagaactggaacggcgtcgtttaaaacaacagcaacaacatgcgaatgtgatg
gaagatggagaaattgcaaacgttattgattggcatgatttcgttgtagtagaaaccata
gattttccaatcgaggaacaagtcgacgtcgaattgtctatgttgccaacaaaaacggca
accacaaccacatctaccgcctccggaatggtcacggataatgatggtggtgctgcttct
gcttcggctgacaatgctatggaagaatcgtcggacgacgacgatggcgacgacgatgct
ggagaagaaactatccgtgtcgttccatcgtacacaccaaaggtggtaggaacattcgat
ccatctatgtcacgagctattgatccaattacagggaaaagtgtttcggtcgccgatatg
ccggaacatatgcgtatccaactcctcgatccgaaatgggccgaagaacggaaaaaattc
caagacaagcagaaggacagcaacttggttgggggagacgccattgttgccaatatggca
agattttctggtggtaacgatatcgataacaacagcaacaatgctacttcgggtgtagct
aacggggcaactacaacgcaaatgtcaacaccatctgtagcagcagcgattacgacggct
ccgagaatgaaacgtcctcctcctcctcctcctcctcctcctccttttggggcaaccgca
actgtcaccaataccaccccagtcggatttcctggagcttcgactggaacgggacccgta
attaatactgctggagaaccgtctatgaaaaagctacggaccaatgcatcagatcctcgt
cttggtccactgccatctcagccgcaacataaagttacgatcgcacctgtgcctcccagt
acatcgactttaagtggtagtaatatcggtaccaacaacaacaacaatagtaatgcgacg
ccttcttctgtcacagattcttcaccaacgatcggtaatccgacgactacgacggacgca
acgcaaggaataaccgatactacagctatagatactacagaacccgccgaggagaagaaa
ctccttccagctaatgagttcatcgcaagcttagatgaaccagtggttgaacttcaagta
cgtgtcccgaacgatcaagcacaacagagttggaattttttcggacagaccttaacgtta
acatcggtcgatgttacatcaaaagttaaggacgtaaaagatatattatccaaatcgcat
ttgaatggtatgccaccaaataaaatccaattaaaggatcctaatggtggatttttgagc
aataatgccacacttgctacactgaacatcggtccaaccgcaatattggaactaaaaact
aaacaacgtggtgggagaaaataa

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