Fragilariopsis cylindrus: FRACYDRAFT_235118
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Entry
FRACYDRAFT_235118 CDS
T04784
Symbol
PolE
Name
(GenBank) DNA_pol_E_B-domain-containing protein
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
fcy
Fragilariopsis cylindrus
Pathway
fcy03030
DNA replication
fcy03410
Base excision repair
fcy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRACYDRAFT_235118 (PolE)
03410 Base excision repair
FRACYDRAFT_235118 (PolE)
03420 Nucleotide excision repair
FRACYDRAFT_235118 (PolE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcy03032
]
FRACYDRAFT_235118 (PolE)
03400 DNA repair and recombination proteins [BR:
fcy03400
]
FRACYDRAFT_235118 (PolE)
Enzymes [BR:
fcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRACYDRAFT_235118 (PolE)
DNA replication proteins [BR:
fcy03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
FRACYDRAFT_235118 (PolE)
DNA repair and recombination proteins [BR:
fcy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
FRACYDRAFT_235118 (PolE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
Lipl32
Motif
Other DBs
NCBI-ProteinID:
OEU21492
JGI:
235118
UniProt:
A0A1E7FTJ6
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MANPALRRRQLARTCKKYGLLIQPNALPILIEEMESRDHGNIDGGSTTFGDFLTVLQTKL
SRSSSASTANLVTLDLVERVLLEEQQEQQQQQAQLLAAKAKQDAKLKKRKQQQQKILIQN
EQDDEEEEIDETSSNNNNYNSLVAVSSKSKLKSSTLVPSVSRSSNSSSRSSNITNNKKSK
LWKVISAFETPKLVYDSMRKQFRYEQGSASSSLMGSSQDIMTMRIQRYELVKQKVDRSRQ
EQRLSYLTTIDRLLGTKNNHTQLFNNNSTSSSSASELSLLGMLKSNPSLRCLELEDPTGC
VPLRIDLLLDNDNNDNNDIIGCDVDTTGIYLEGSMVLVKGNHEESTLLTTNSEDNDGTVF
RCTSIELAPIEVKSITKLHLPPSPYSYDDDFNNSGGGRSQSNSSSPLPIYSLSNLSLDDP
DCIDRLEFVIDRMVQGNKKKRSSSSMEIVDDEDQEDENNVPDSILVLFGDFCTESTTSSQ
ALDELASVLQDKNIPSKHSILLIPGPNDVGSNACWPLPAWNKKNIPSSMHPFLAASNSNT
SNISTKRMRDNNNNASSLKGGNVYLCSNPCRLECADGRQVVLLRKDLIRESLQHQVLADA
DSIAYSNAKAASARGSSRASSQSQSHPSSPSLTSRIIHHALSQGHLSPSSSSQQAASTSC
APIYWNYDHSMTLYPLPDLMIVGLDPEYLDTGFDNNTESEVGSRNVGCRVVSPASKPSQN
EWECSLTILRSIGVLKKLKA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatccagcattacgacgtcgtcaattggcacgaacttgtaagaaatatggttta
ttaattcaaccaaatgcattacctatattgatagaagaaatggaatcacgtgatcatggt
aatattgatggtggtagtactacatttggcgattttttaacggtattacaaactaaatta
agtcgttcatcatctgcatccacagctaatttagttacattagatttagttgaacgtgtt
ttattagaggaacaacaagaacaacaacagcaacaggcacaattattggctgctaaagct
aaacaagatgccaagttgaaaaagagaaaacaacaacaacaaaagattttgattcaaaat
gagcaagacgacgaagaagaagaaatagacgaaaccagtagtaataataataattacaat
tcacttgttgctgtttcctctaagtcaaaattgaaatcatccactttagtaccatctgta
agcaggagcagcaatagtagcagccgcagcagtaatattactaataataagaaatcaaaa
ttatggaaagttatttcagcttttgagacacccaaattagtatatgattctatgcggaaa
caatttcgatatgagcaaggtagtgcaagtagtagtcttatgggttcctcacaagatata
atgactatgagaatacaacgatatgaattagtgaaacaaaaagtggatcgatctcgtcaa
gaacaacgtttatcctacttaacaactattgatcgtttattaggaacaaaaaataatcac
acacaactttttaacaacaacagtactagtagtagtagtgcttctgaacttagtttgtta
ggaatgttgaaaagtaatccatcattacgttgtttagaattagaagatccaacaggatgt
gttccattacgtattgatttattattggataacgataacaacgataataacgacattatt
ggttgtgatgtggatactactggtatatatttagaagggagtatggtattagtaaaaggc
aatcatgaagaatcaacattattaaccactaattcagaagataatgatggtacagtattt
cgttgtacatctattgaattagcaccaattgaagtcaaaagtatcacaaaattacattta
ccaccatcaccctactcctatgatgatgattttaataattcgggtggtggacgatcacaa
agtaatagttcttcaccattaccaatttattctttatcaaatttatcattagatgatcct
gattgtattgatcgattggaatttgttattgatcgaatggtccaagggaacaaaaagaag
aggagcagtagcagtatggaaattgttgatgacgaggatcaagaagatgaaaataatgta
ccagatagtatccttgttttatttggtgatttttgtactgaatccacaacatcctcgcag
gcattagatgaattagcaagtgtattacaagataaaaacattccatcgaaacattcgatt
ttattaattcctggtccaaatgatgtaggttcgaatgcatgttggccattacctgcatgg
aataaaaagaatataccatcctcgatgcatccatttttggctgcatccaattcaaataca
tcaaacattagtacgaaacgaatgagagataataataataacgcttcgtcattgaaagga
ggaaatgtttacctctgtagtaatccatgtcgattggaatgtgcggatggaagacaagtt
gttttactacgtaaagatttaatccgtgaatcacttcaacatcaagtattagctgatgct
gattcgattgcatattctaatgctaaagcagcatcagcacgtggttcatcacgtgcttca
tcacagtcacagtcacatccatcatctccatcgttgacctcacgtattattcatcatgca
ttaagtcagggacatttatcaccctcatcatcgtcccaacaggcagcatcaacatcatgt
gcaccaatctattggaattatgatcattccatgacattgtatccattaccagatttaatg
attgttggattagatcctgaatatttagatacaggatttgataataatactgaaagtgaa
gttggtagtcgtaatgttggttgtcgtgttgtttcaccagcctcgaaaccatcacaaaat
gaatgggaatgttctttgacgatattacgaagtatcggcgtactaaagaagttaaaagca
taa
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integrated database retrieval system
