Fragilariopsis cylindrus: FRACYDRAFT_235945
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Entry
FRACYDRAFT_235945 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K27103
serrate RNA effector molecule
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_235945
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
FRACYDRAFT_235945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SERRATE_Ars2_N
ARS2
Motif
Other DBs
NCBI-ProteinID:
OEU19882
JGI:
235945
UniProt:
A0A1E7FNZ0
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MAVDEFGREIPGARGGGRRSPSPHRHHQHREGSGGGGGSALPTHLNDSLPTSRYEERGVG
GGDRDHYRDRDRDRGGDDRSSSRKRKTRSRSPPPTSSRRGGDRGSDGGGGNDRSNNYKKS
NNKPHPSTVYVEEPMLCQFLWKEANEEKTEEDYDEYRKSYCLNYVRTFFNEHMDDSWFRF
MYSPLERYQVAQQEKNRAAEESKEFAQELESSLSKTISSSSTTTNNGSSSSSSSDASFFV
LKSRLGGGIRQTGKPEYHHHSSPTKSSRQSLVNPIPATHVLALTNQVLPIREVPHFVTDE
QLTVALMQQVSSKTSKAMDPNSMILYSGPPAADLTRTAYLQATDEVRKEIIQTLNHSEKG
GGIAKGGSGSGSAGASHVPRKEDTFVPKTLELTVECSDAYGRLEVDADGKGGEPEERGGV
PSRKASVWVSTKPINPHVQVLSAALSSKKRIQEDQAAAFKLAKAYDRKRDIPSESRLENL
LPKAVPNIMATVAEAAAAAKGNEGSSSEAAAAPDDSLSSQDLEDALDVTIAYLRRVHLFS
YYKGCQAAPRVADVLNGNHAASTIYFRLANADELLEPTKDVPDMEMGDGVPKIDLLVQRL
KDSIQSALQESEKWDSDDNDESSLPTTCIFVNEEIDREAKDIEYQQSQVEDGWIEDHATV
DGDGRARCAFHFCRKLFKDSSFLKKHLIKKHSEFLRAEMAKCHDSYMMKAWDSQEKRPVP
PILVDCGHGFGVQPSPVLGAAVPLVADPEPELWRREEERRDFEEKEAEARRERHAAASLD
QPLSEGRGHIHDNNNNRGGERVNTFVDVDDMKEEKVEIAFDKIEIPVEPLKKKRKKKKLL
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggatgaatttggacgtgaaattccaggggcccgaggagggggtcgacggtca
ccttccccgcatcgtcaccaccaacatcgcgaaggttccggcggcggcggcggtagtgct
ttgcctacccatctaaatgattcacttcctacatcacgatatgaggagagaggagtaggt
ggtggggatcgtgatcattatcgtgatagagacagagatcgcggcggtgatgatcgatcc
tcatctcgtaaacgcaaaactcgttcacggtctcctccaccgacgtcttcccgtcgtggt
ggtgacagaggaagcgacggaggaggaggaaatgacagaagcaacaattataagaaatct
aataataaaccacacccgtcaactgtttatgtagaggagcctatgttgtgtcagtttttg
tggaaggaagccaatgaagagaaaactgaagaggattacgatgagtatcgcaaatcgtac
tgtctgaattatgtacgaacttttttcaatgaacatatggacgattcttggtttagattt
atgtacagtccattggagcggtatcaagtggcacaacaggaaaagaatcgagcagcagag
gagtctaaagagtttgcacaagaattggaatcgtctttatctaaaacaatttcctcttcg
agtacaacaacgaacaacggcagtagctccagcagcagtagtgacgcatccttctttgtt
ctcaaatctcgtttgggaggtggaattcgacagactggcaaaccagaatatcatcatcat
tcttcaccaacaaaatcgtcgcgacaatctctcgtgaatcctattccggcaacacatgtg
cttgctttgacaaatcaagtgttgccaatacgcgaggttccacattttgttacggacgag
caattaactgtggcgttgatgcagcaagtttcctctaagactagtaaagccatggacccc
aattctatgattctgtattcgggaccaccagccgccgatctcacccggactgcatactta
caggcaaccgacgaggttcgaaaggaaataattcaaacgctcaaccattcggagaaaggg
ggtggtatcgcaaaaggtggtagtggtagtggatcggccggtgcctcgcacgttccacga
aaggaagatacgtttgtaccgaaaacattagaactaaccgtagaatgtagtgatgcatat
gggagattggaagttgatgcggatgggaagggtggagaacccgaagaacgaggtggtgtc
ccatcacgtaaggcatcggtttgggtatcgacaaaacctataaatccacacgtgcaggtc
ttatctgccgcattatctagcaaaaaacgtattcaagaggaccaagctgccgcattcaaa
ttggcgaaggcatatgatcgtaaacgagatattccttccgaatcacgtttggaaaacctc
ctaccaaaagcagtcccgaatataatggcgacagtagcggaggcagcggcagccgctaag
ggcaatgaaggcagtagtagtgaagcagcagcggcaccagacgattcgttatcgtcccaa
gacctggaagatgccctggatgttactatcgcgtatctacgtcgagtacatctcttctct
tattacaaaggatgtcaagcagccccccgagtagccgatgtcttaaatgggaatcatgcc
gcttctacaatctatttccgcttagcgaatgcagatgagttgttggaacctaccaaggat
gtccccgacatggaaatgggcgatggtgtgccaaagatagacttattagttcaacgacta
aaagattcgattcagagtgccctacaagagtcagagaaatgggatagtgatgataatgat
gaatcatcattgcccactacttgtatctttgttaacgaagaaatcgaccgtgaggcgaaa
gatattgaatatcaacaatctcaagtcgaagacggatggattgaagaccatgccacagtc
gatggagatggccgtgctcgatgtgcatttcatttttgtcgcaaacttttcaaagattcc
tcatttttgaaaaagcatttaattaaaaaacattctgaatttcttcgagcggaaatggca
aaatgtcatgattcgtatatgatgaaggcatgggattctcaggaaaaacggcccgtcccg
cctattttagtcgattgtggacatggatttggtgtacagcccagtccagttctcggtgca
gctgtaccactggttgctgatcctgaaccagaattatggagacgagaagaagaacgacgg
gattttgaagaaaaagaggcagaggcacgaagagaacgtcacgccgctgcttcacttgat
caaccactttcggaaggtcgtggtcatattcatgataataacaataatcgtggtggtgaa
agggtgaacacttttgtcgatgtagatgatatgaaagaagagaaagtagaaattgctttt
gacaaaattgaaatcccagtcgaaccacttaaaaagaagaggaagaagaaaaagctacta
taa
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