Fragilariopsis cylindrus: FRACYDRAFT_236431
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Entry
FRACYDRAFT_236431 CDS
T04784
Name
(GenBank) KH_1-domain-containing protein
KO
K13210
far upstream element-binding protein
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcy03019
]
FRACYDRAFT_236431
03041 Spliceosome [BR:
fcy03041
]
FRACYDRAFT_236431
Messenger RNA biogenesis [BR:
fcy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
FRACYDRAFT_236431
Spliceosome [BR:
fcy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
FRACYDRAFT_236431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
WW
MOEP19
Motif
Other DBs
NCBI-ProteinID:
OEU20357
JGI:
236431
UniProt:
A0A1E7FQE5
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MSGDDSNADAQEAEKRERSDDNGADDAEQPPSKVAKTEDENQQDSIAATDEGSPTETKDE
ADASAPPVAQVADLEKETPAETDPAVTEDTGTAAPVTDSALPPGLPPSGAAEAPIVANLD
DNLEEKDEISAVFVGRVIGKGGEMIRDLQARSACRIDVDQNVPPGQPRLITYRGSRKTVD
FAKQLVHMLCQENQSEADLPLGEAKREFLVVPASAVGKIIGRGGEMIRELQSRSQAKIQV
DHRGQSGLDVSQKQVTMTGTEQSVVKAKEMVLFLVANPMQDAMQSITMLIDDKIQRGGVW
GSGPPYPNLPQGGQNMQPSGGGGGYGQQQQQQSYGGGGGNQGSYGGAPQSYQQQQPPAAA
ASFGGGGGGGVETEMFYAAKHFMGRVIGSKGVTINDLQKRSGCDIQINQDVPPGRDCEIT
LRGPRQGIENAKNMLREVIETGPNHPYQGGTGGGGGGGGGGGGQSFGGYQQGGYGQQQQQ
PQQQQPYGYQAQGGYQQQQQYGQGSYGQNTGYGGAAQAQQYPQGQFQAPPQAAYGGAPSG
APPVLEWKAATAPDGQQYYYNERSGETTWSKPPGMP
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgacgatagcaacgcggatgcccaagaggcagaaaaaagagaacgatctgac
gataacggtgccgatgatgccgaacaaccaccttctaaagtcgcaaaaaccgaggacgaa
aaccaacaagactccattgctgctactgatgaaggatctccaactgaaacgaaagatgaa
gccgatgcgtctgctccacctgtcgcacaagtagccgatttggaaaaagaaacacccgca
gagacagatccagctgtaacggaagataccgggacagcagcccctgtaactgattcagca
ttgccaccgggactaccaccgtcgggagcagcagaagctccaattgtagcaaatctagat
gataacttggaagaaaaagacgaaatttcggctgttttcgttggtagggtgatcggtaag
ggtggagaaatgattcgtgatttacaggcgaggtctgcatgtagaattgatgttgaccaa
aatgtacccccgggacagcctcgattgatcacatatcgtggatctcgtaaaactgttgat
tttgcgaagcagcttgtacatatgttgtgccaagaaaatcagagcgaagcagatttgcct
cttggagaagcgaagcgcgagtttttggtagtccccgcaagtgctgtcggaaaaattatt
ggccgtggcggcgaaatgattagggagcttcaatcaagatctcaagcaaaaattcaagtg
gatcatagaggacagagtggtctggatgtatctcaaaagcaagtcaccatgactggaacc
gaacaatccgtggtgaaggcgaaagaaatggttctttttttggtggccaatccgatgcag
gatgctatgcaatcgattaccatgcttattgacgacaaaatacaacgagggggtgtttgg
ggatctggtccaccttaccctaatcttcctcaaggtggtcaaaacatgcaacccagcggt
ggaggtggtggttacggtcagcagcagcagcagcagtcctacggtggtggtggtggtaat
caaggatcttatgggggagctcctcaatcctaccaacagcaacagccaccagcggctgca
gcatcttttggtggtggtggcggcggcggggttgaaaccgagatgttttatgccgcaaaa
cattttatggggagagtaattggatccaagggtgttacgattaacgatctccagaaaagg
tctggatgtgatatccaaatcaaccaagatgttccaccaggtagagattgtgaaatcact
cttcgcggaccacggcaaggaattgaaaatgcgaaaaatatgcttcgtgaagttatcgag
accgggcctaaccatccataccaaggtggtaccggtggtggtggcggcggtggcggcggc
ggtggtggtcaatcatttggaggatatcagcaagggggttatggtcagcagcagcagcag
ccgcaacaacagcaaccatatggatatcaagcgcaaggagggtaccaacagcaacagcag
tacggacaaggctcctatggtcaaaatactgggtacggtggcgctgctcaagctcaacag
tatcctcaaggtcaattccaggcaccaccgcaagcggcatatggaggagctccttcgggc
gctcctccagtattagaatggaaagctgcgacagcacccgatggtcaacaatactattac
aacgaaagatcgggagaaacgacttggtcgaagcccccaggaatgccataa
DBGET
integrated database retrieval system
