Fragilariopsis cylindrus: FRACYDRAFT_237159 Help Entry FRACYDRAFT_237159 CDS       T04784                                  Name (GenBank) hypothetical protein   KO K12600   superkiller protein 3 Organism fcy  Fragilariopsis cylindrus Pathway fcy03018   RNA degradation Brite KEGG Orthology (KO) [BR:fcy00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     FRACYDRAFT_237159  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fcy03019]     FRACYDRAFT_237159 Messenger RNA biogenesis [BR:fcy03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Ski complex      FRACYDRAFT_237159 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_2 TPR_16 TPR_12 TPR_1 TPR_14 TPR_19 TPR_CcmH_CycH tRNA_synthFbeta Motif Other DBs NCBI-ProteinID:  OEU18877 JGI:  237159 UniProt:  A0A1E7FL71 LinkDB All DBs Position Unknown AA seq 1620 aa AA seqDB search MGSSTLSPAKLKAYLSSMKERYLDQSSSSSSPSEETTTTNPPLTANDALIGVLKMELLLR GVLVEDENKIYKQIQSSIGKTLLVDDSSLKIPKPLLAGANIMAGRITEAFYHQLKIDSNS SSSLPKHLIPSEENVGAIRRAKEIEDERWLVLLQRIPSPPSIDNNNSNTEIGDINNIDSY FNAILQIALGYYTTAALIQSDTPPMWKKIWDVWTLLEKVATSSSSSSPEDNNNNTQSSPY EAQIAIENLIRIALLKHNTKRASELQLRLIQSYLNQNRIPLSTASCNEYKSKATITQSFG DSITQDLPPLDRKDIKRYNADKARSTLIACQSYYEEEEETTKHGKEEEESTTTIPTTIDS ETMLYQTLQVEILVAEEDTNDEAQEIEISNQFIERATILRDTLIATWALTFKYNLNSNNN NSKDEEGERKSSIESGNEGEIKNLNLSFDWVYQSILRLKDKAGIISQKTRSYHKTWNVLL QYILPILKEIEQQIAEIEKIPCVDEDVKSSNEIRIQASIEWLNRTLGNDGSRNAKMKLIE TTVSILPDIFWMLIGDGDENIIIDPLDKELKLVADILSGLIHWQEKVESERLQREKIALT VGTQESSVTKITLRWQHAKESALCFVCQDDNASIYQITNDAISRSKKKQKKGFLLFIQCL VSWSGFYQHPWPYCTNLSDARRLLAAAKSDLGRPLTVSEEIFFISASADAELLNGGFVQN ASKQYSGVLGKLQQDDDELLVNAYFVSLLRAHCYNGLARIHQADQEEEYTYSDSINGSQT KKSLEILEDLDVPPVVHPLSIWHSRSIFEASKAHELSVARQLTADSLIRFGRFEEALSFL KTAVADSPLDADAAMALGAFLLRVAFYVHKERNKARDKEAQIHLLKAAKLDSSKPNPFAL LGIWYEEMGDSKRAQGCYVKSLKLDPCNPIAGRGLLRLASNKEDHIGLLQVAIDKNSPLN GWAWNAVGLNKAYNDGDDDLAVVAILKALRCRDVSIPDKEMLGIFYKPPSLSNEVNERSA ALTDLGMCYRRLGRFTASIRAFHASIDAAGIDSAQSATFISCAQVEQELGCFDEAAEKFA RVILRNDSRLSVALYGQAVALFSTAKRDLMDGKAGAAFFSIKHGIENCLNSSIKSGCELK LLGDLYSFGASFPFKVFCDDDNPIQDMEYCFQKQLEFVTRGEEAFRSSLTSFGDEEDMLA IKSSILCDIALNILLQAQLMSSIEIDSDINSRSQKVIARYDRAAEAFRQAIEYNPIHAPS WCGLGCSVLKEDPLLAQHAFSRCVQIESMSPDAYANVGFMYTSKLAINASRSTMEALTQV ADTPMMWMNCAFILEREAERILAEGDKCKPNDSISQAADAYRASLQVMRHPEAQLGLSLT GRMLHSNEETKQDMPFSNLCTLKRKDCHSFMNEYMDASFSANGAASVFQGVMSIEKGSSM STYAMWQNDIFMKGKEMVGFVKGGENISSKSLHDASITKLAVAVEAPIEVDEKKKCASSV STGATNLQRQIWNQPDRADLWLSLAKVFIENGAIESAKIAVSRAAFMSSQELMSSSRINS RTLSFVDSKTISEAISLEYWLKEIQTKKPGTTYSLQRALMMNPGNAVARQGLLLAEAKSE NT seq 4863 nt NT seq  +upstreamnt  +downstreamnt atgggcagttcaacactatcaccggcgaaattgaaggcttacctgtcctctatgaaggaa cgttaccttgatcaatcatcatcatcatcatcaccatcggaggagacaacgacgacaaat ccaccacttactgcaaatgacgcacttataggcgtattgaaaatggaattactgttacga ggagttttagttgaagatgagaacaaaatttacaaacagattcaatcttcgataggaaaa actttactagtcgacgactcatcattaaaaatccctaaaccattgttagctggagctaac attatggcaggacgtataacagaagcattctaccaccaattgaaaattgatagtaatagt agtagcagtttaccaaaacatctcatcccgtccgaagaaaatgtgggtgctatacgaaga gcaaaggaaattgaagacgaaagatggcttgttctattacaacgaataccgtcaccacca tccattgataataataatagtaacacagaaatcggtgatattaataatatcgatagttat ttcaatgccatattacaaatcgcactgggatattataccacggcagccttgattcaatcg gatactccaccaatgtggaaaaagatatgggatgtttggactcttctggagaaagttgct acttcttcttcttcttcctcacctgaagacaataacaataatacccaatcttctccttat gaagcacaaattgcgattgaaaatctgatccgcatcgctctattgaaacataatactaag agagcatcagaactacaattacgtctgatacagagctatttgaatcaaaatcgaataccg ttgtcgacagcgtcctgtaatgaatacaaaagtaaagcaacaataacacaatcgtttgga gattcgattacacaagatctacccccgctcgataggaaagatatcaaacgttataatgct gataaagctagatcaactttaatagcatgccaatcttactacgaagaagaagaagaaacg actaagcacggaaaagaagaagaagaatcaacaacaacaatcccgacaacgatcgattct gaaactatgttatatcaaacactacaagtggaaattctcgtggcagaagaagacactaat gatgaggcacaagaaattgaaatctcaaatcaatttattgaaagggcgactatcttacga gatacattaatcgctacgtgggcattaacttttaaatacaatctgaattccaataataat aatagtaaagatgaagaaggagaaaggaaaagcagcatcgaatctggtaatgaaggagag atcaagaatctaaacctatcctttgattgggtttatcaatcaatccttcgattgaaagac aaggctggaattattagtcaaaagacacgatcgtaccataaaacgtggaatgtactactt caatatatccttcccattttgaaggaaatagaacaacaaattgccgaaatagaaaaaata ccttgcgttgatgaggatgtaaaaagtagtaacgaaatacggatacaagcatcaatcgaa tggctgaataggacactgggaaacgatggaagtagaaatgccaagatgaaattaattgag actaccgtttcgatactcccggacattttttggatgctcatcggagacggagatgaaaac attataatcgatccacttgataaagaattgaaactggttgccgacatattgtcaggattg attcactggcaagaaaaggtagagtcagagcgcttacaaagagagaagatagcactgacc gtcggaacccaagagagctcggtaacgaaaattacactacgatggcaacacgcaaaagaa tcagcgttgtgttttgtttgtcaagacgacaatgctagcatataccaaattacaaatgat gccatttctaggagtaagaaaaaacagaaaaaaggatttttgctttttatacaatgtttg gtgagttggtcaggcttttaccaacacccatggccatactgcactaatctatctgatgct agacggttgctagctgctgcaaaatctgaccttggtcgacccctaacagtatcggaagaa atctttttcatcagcgcaagcgctgatgcagagttactaaacggcggcttcgtgcaaaat gcctccaagcaatacagcggagttcttggaaaacttcaacaagacgatgatgagcttttg gtgaatgcctactttgtttctttgttgcgagctcactgttataatggactggcacgaata caccaggctgatcaagaagaagagtatacatacagcgattctatcaacggatcgcaaaca aagaaaagtcttgaaattctggaagatcttgatgtaccacctgtagttcaccctctttcc atttggcactcacgatcaatttttgaggcatcgaaggctcatgaattgagtgtcgctcga caattgactgctgattcgctcattcggtttggtcgctttgaagaagctctttccttccta aagactgcagttgctgattcaccactagatgctgacgcggctatggccttgggagcattt ctactacgtgttgccttttacgttcataaggaacgaaataaagctagagataaagaagca caaatccatctactgaaagcagctaaattggattcatcaaaacctaatccatttgctctt ttaggtatctggtacgaagagatgggagattcaaagagagctcagggatgttatgtgaaa agccttaagttagacccttgcaatccgatagcaggacggggattgttgcgtctggcttcc aataaggaagatcatataggccttttgcaagttgccattgataaaaattcacctttgaat ggatgggcatggaatgcagtgggtctgaataaggcgtacaatgacggagatgatgactta gccgtggttgcaattctcaaagccttgcggtgccgagacgtttcaattccagataaggaa atgcttggtatcttctacaaacccccatcgttatccaatgaagtgaacgaaagatctgct gcgctgactgacttggggatgtgctaccgtagacttggtagattcactgcttcgattcga gcctttcatgcgtcgattgatgctgcgggaatagattctgcacaatcggctacattcatc tcctgtgcgcaagtagaacaagaattaggatgtttcgatgaagcagcagaaaaatttgca agagtgattctaaggaacgatagcaggctttcagtcgcgttatatggacaagcagtggca ttattctcaacagcaaagagagacttgatggacggaaaagctggcgctgcattttttagt atcaaacatggtatcgaaaattgtctgaattcttccattaaatctggttgtgagctcaaa ctacttggagatttatactcctttggagcctctttccccttcaaggtattttgtgatgac gataatccaattcaggacatggaatattgctttcaaaagcaattggaatttgttacaaga ggagaagaagcatttcgatcatcccttacaagttttggggatgaggaagatatgcttgct attaagagctcgattttatgtgacattgctttaaatatacttttacaagctcagttaatg tcttcgattgagattgacagcgatattaattcacgaagccaaaaggttatagctagatac gatcgtgcagcagaagcttttcgtcaagcaatcgagtacaatccaatccacgctccttca tggtgcggtcttggatgttccgttcttaaagaagatcccttattggcccagcatgcattt agtcgatgcgttcagatagaaagcatgtctcctgatgcctacgccaatgtcggcttcatg tacacttccaaacttgcaattaacgcctcgagaagcacgatggaggccttgacacaagtt gctgataccccaatgatgtggatgaattgtgcttttatacttgagcgggaagcagaaagg attcttgcagaaggtgacaaatgtaaaccaaatgatagcatcagtcaggcggctgatgct taccgagcctctttgcaagtaatgcgacatcctgaagcccaactcggcctctccctaact ggtcggatgctgcattctaatgaggagacaaagcaagatatgcctttttccaatttgtgc accctcaaaaggaaagattgtcattcgtttatgaatgaatacatggatgcctctttcagc gcaaatggtgcagcttcagttttccaaggtgtaatgtctattgaaaagggttcaagtatg tctacgtatgcaatgtggcaaaatgatatctttatgaagggaaaagaaatggtgggattc gtcaaagggggagagaatatttcatctaagtctcttcatgatgcttcgataactaaactt gccgtggctgttgaagctccaattgaagtggacgagaaaaagaagtgcgcttcatcagtg tctacgggagcaacgaatcttcaacggcagatctggaaccagccggatcgcgctgacctt tggctgtcattggcaaaggtatttattgagaatggtgcaattgaatctgcaaaaatagct gtttccagagcagcttttatgtcatcacaagaattgatgtcatccagtcgaatcaacagt cggactctttccttcgtggactcaaaaacaatttcagaagcaatatccttggaatattgg ttgaaggaaattcagacgaaaaagcctgggacaacatatagcttacaacgagcccttatg atgaatcctggcaatgctgtagcccgacaaggtcttttattggccgaggcaaaatccgag taa

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