Fragilariopsis cylindrus: FRACYDRAFT_239013
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Entry
FRACYDRAFT_239013 CDS
T04784
Name
(GenBank) hypothetical protein
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
fcy
Fragilariopsis cylindrus
Brite
KEGG Orthology (KO) [BR:
fcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fcy04121
]
FRACYDRAFT_239013
Enzymes [BR:
fcy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
FRACYDRAFT_239013
Ubiquitin system [BR:
fcy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
FRACYDRAFT_239013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR_1
Ariadne
IBR
UBA_ARI1
IBR_2
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-ProteinID:
OEU16419
JGI:
239013
UniProt:
A0A1E7FE35
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MSSSAEEDEYEYDYSDEEVGDDDSGMDWNPSAIASENPNAAPTMMYVHQKKGIRILPANE
LLPEMKRRLKDVTEILDISPAAAAVLLRAHNWSKEQLCEVFYADSEKILKKCGVNHRCNP
KLPPKSSDDNCPICYDEMKVGTKMAMPCGHEFCLDCWHDFCVNAIKQEGPSCVYSTCPDA
SCTECLTEVEVETACPDYLQKFQTFQLRNFVQSNTLTRWCPGIGCERIACAPNASAMEQE
GNVAHCDGCCTSFCLICGEEPHAPSGCKDLALWNEKCRNESETANWILANTKSCPKCASR
IEKNQGCNHITCQRCKHDFCWICLQEWSTHGANTGGYYKCNKYDSGNSDTADQSDAAKAK
RELDRYLHYYKRFHAHSEAQTFAKKQLNETENRMVRLQESSENAKWSDVEFLKTANEQLV
ECRRVLKYTYVYAYYLNSSAKMQKERFENHQEMLEKFTENLSELSEKPLDQMDRTEVVNT
TRVVDRFMKNILQCVDEGMDIHL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatctgctgaggaggatgaatacgaatatgattactctgatgaggaagtcgga
gacgacgatagcggcatggactggaacccttccgctattgcttctgagaatccaaacgcg
gcaccaaccatgatgtatgtacaccaaaaaaaggggatccgcatcttgcccgccaacgaa
cttcttccagagatgaaacgtcgtttgaaggatgtcacggaaatccttgatatatccccc
gcggctgctgctgttctactacgagcacacaactggtcgaaagaacaattgtgtgaggta
ttctacgctgattccgaaaagatattaaaaaaatgcggcgtcaatcatcgatgcaatcca
aaacttcccccgaaatcttcagacgacaactgtcccatttgctacgatgaaatgaaagtc
ggtacgaagatggccatgccatgtggacacgaattttgtttggattgttggcatgatttt
tgtgtcaatgctatcaagcaggagggaccctcatgtgtctattctacttgtccggacgca
tcttgcacagaatgtttgacggaggttgaagtggaaactgcatgcccggattatctacaa
aagtttcaaacctttcaacttcgtaatttcgttcaatcgaacacactaactcgttggtgt
ccaggaattgggtgcgaacgtattgcctgcgctccaaatgcatcggcgatggagcaggaa
ggtaacgtcgcacactgtgatgggtgttgtactagcttttgtttaatttgtggtgaggaa
cctcatgctccttctggttgtaaggatctggcattatggaatgaaaaatgccgcaatgaa
tccgaaacagcgaattggattctagctaataccaagtcctgtcctaaatgtgcttctagg
atagaaaaaaatcaaggctgtaaccatattacttgccagagatgcaagcacgatttctgc
tggatctgtttacaagaatggtcaactcatggagctaataccggcggatactacaagtgc
aacaagtatgattcaggtaattccgacacagctgatcagtcagacgctgccaaggccaaa
cgagaacttgatcgatacctacactactacaaacgttttcatgcacattccgaagcccag
acatttgcaaagaaacagctcaatgagaccgaaaaccgtatggttcgactacaggaatca
tcagaaaatgcgaagtggagcgacgttgaatttcttaagacggccaatgaacaattggtg
gaatgtcgaagagtcttgaagtacacgtacgtttatgcatactatctgaattcttctgct
aagatgcaaaaagaacgatttgagaatcatcaagaaatgcttgagaaattcacagaaaat
ttgagcgaactatcggaaaagccgttggatcaaatggatcgaacggaagttgtcaataca
actcgggttgtcgatcgtttcatgaagaatattcttcaatgtgtagatgagggcatggat
attcatctttga
DBGET
integrated database retrieval system
